Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P24
         (873 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF001626-1|AAC47758.1|  316|Drosophila melanogaster muscleblind ...    39   0.008
AF001625-1|AAC47757.1|  203|Drosophila melanogaster muscleblind ...    39   0.008
AF001536-1|AAC01949.1|  243|Drosophila melanogaster Muscleblind ...    39   0.008
AE013599-2447|AAO41359.1|  203|Drosophila melanogaster CG33197-P...    39   0.008
AE013599-2446|AAO41358.1|  297|Drosophila melanogaster CG33197-P...    39   0.008
AE013599-2445|AAO41357.1|  243|Drosophila melanogaster CG33197-P...    39   0.008
BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p pro...    33   0.39 
AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA...    33   0.39 
AE013599-2448|AAO41360.1|   84|Drosophila melanogaster CG33197-P...    33   0.39 
AF001422-1|AAC01948.1|   84|Drosophila melanogaster Cys3His-type...    32   0.90 

>AF001626-1|AAC47758.1|  316|Drosophila melanogaster muscleblind B
           protein.
          Length = 316

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>AF001625-1|AAC47757.1|  203|Drosophila melanogaster muscleblind A
           protein.
          Length = 203

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>AF001536-1|AAC01949.1|  243|Drosophila melanogaster Muscleblind
           isoform C protein.
          Length = 243

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>AE013599-2447|AAO41359.1|  203|Drosophila melanogaster CG33197-PA,
           isoform A protein.
          Length = 203

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>AE013599-2446|AAO41358.1|  297|Drosophila melanogaster CG33197-PB,
           isoform B protein.
          Length = 297

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>AE013599-2445|AAO41357.1|  243|Drosophila melanogaster CG33197-PD,
           isoform D protein.
          Length = 243

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPPRTLLKELFRFCH 430
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H      +       C+
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACY 59

Query: 431 DYXNKGCYRTN--CKFLH 478
           D     C R    CK+ H
Sbjct: 60  DSIKGRCNRDKPPCKYFH 77


>BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p
           protein.
          Length = 597

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 329 CKDYIRGSCARENCKFIHEK 388
           C+ Y+RG C RE+C ++H+K
Sbjct: 430 CRYYLRGVCVREDCPYLHKK 449



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 329 CKDYIRGSCARENCKFIHEKPPRTLLKELFRFCHDYXNKGCYRTNCKFLH 478
           C  ++RG C +  C   H     TL  E    C  Y    C R +C +LH
Sbjct: 403 CVSFLRGECTKPKCLLSHNV---TL--EKMPVCRYYLRGVCVREDCPYLH 447


>AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA
           protein.
          Length = 597

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 329 CKDYIRGSCARENCKFIHEK 388
           C+ Y+RG C RE+C ++H+K
Sbjct: 430 CRYYLRGVCVREDCPYLHKK 449



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 329 CKDYIRGSCARENCKFIHEKPPRTLLKELFRFCHDYXNKGCYRTNCKFLH 478
           C  ++RG C +  C   H     TL  E    C  Y    C R +C +LH
Sbjct: 403 CVSFLRGECTKPKCLLSHNV---TL--EKMPVCRYYLRGVCVREDCPYLH 447


>AE013599-2448|AAO41360.1|   84|Drosophila melanogaster CG33197-PC,
           isoform C protein.
          Length = 84

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPP 394
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H  PP
Sbjct: 1   MANVVNMNSLLNG-KDSRWLQLEVCREFQRNKCSRQDTECKFAH--PP 45


>AF001422-1|AAC01948.1|   84|Drosophila melanogaster Cys3His-type
           zinc finger protein protein.
          Length = 84

 Score = 32.3 bits (70), Expect = 0.90
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 257 MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCAREN--CKFIHEKPP 394
           M N++NM+ ++N   D   L    C+++ R  C+R++  CKF H  PP
Sbjct: 1   MANVVNMNSLLNG-KDWRWLQLEVCREFQRNKCSRQDTECKFAH--PP 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,050,973
Number of Sequences: 53049
Number of extensions: 600426
Number of successful extensions: 1396
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)