Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_P21
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 34 0.13
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.40
02_04_0382 - 22501041-22501279,22501717-22501810 31 0.93
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 31 1.2
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 31 1.2
08_02_1289 - 25923916-25924586,25925148-25926630 31 1.6
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.1
12_02_0299 - 17051570-17052474,17053542-17053755 29 3.8
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 5.0
07_01_0080 + 587674-588510 29 6.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 8.7
03_05_0292 + 22846273-22846377,22847161-22847823 28 8.7
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 208 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPGARG 366
Y P + P V PP Y P +G P N + Y +PP GRP P P GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 208 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 357
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 31.5 bits (68), Expect = 0.93
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +1
Query: 100 KFFMIFVLALLAMANAQDPVKVVENADSVVINDRNGYEPIDNRPYIVNPPKDYNPNGNGY 279
K ++F L LLA A + ++ D+ + +E P +PP P+ + Y
Sbjct: 11 KALLVFAL-LLAAAFVASAEQTHDDGDNPP--ESPDHEDPPPSPEYYDPP----PSPDYY 63
Query: 280 EPIDNGAYYVDPPQGRPYFKPTPFPGARGG 369
+P + YY DPP Y+ P P P GG
Sbjct: 64 DPPHSPDYY-DPPPSPDYYDPPPSPYYGGG 92
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PPPPPGXXXFXFXGAPXSPXPPP 883
PPPPP GAP P PPP
Sbjct: 231 PPPPPPPKPANIAGAPGLPLPPP 253
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PPPPPGXXXFXFXGAPXSPXPPP 883
PPPPP + G P P PPP
Sbjct: 111 PPPPPPPHLLHYYGHPPPPPPPP 133
>08_02_1289 - 25923916-25924586,25925148-25926630
Length = 717
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -2
Query: 498 VXGVX*ALQYVYLFIPLT*I---HMKF*NILLIHYFVINFLRYSLLPTASTRERGRLEV 331
V GV ALQY+Y +P+ + H+K NILL F YSL+P + +L V
Sbjct: 513 VKGVARALQYLYDELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMV 571
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 199 RNGYEPIDN-RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 342
R Y P +PY P P P G Y P G Y PP+G+P + P
Sbjct: 256 RETYPPQPQVQPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 816 PPPPRAQXXFXFXAPLFPPXP 878
PPPP F APLFPP P
Sbjct: 329 PPPPSFPWPFPPLAPLFPPYP 349
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 214 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 354
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 785 GEGFFPA*XXPPPPPGXXXFXFXGAPXSPXPPP 883
G G A PPPPP AP P PPP
Sbjct: 705 GPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PPPPPGXXXFXFXGAPXSPXPPP 883
PPPPP F P P PPP
Sbjct: 550 PPPPPSGNKPAFSPPPPPPPPPP 572
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 767 SPXEXXGEGFFPA*XXPPPPPGXXXFXFXGAPXSPXPPP 883
+P G+G F PPPPP P P PPP
Sbjct: 78 TPPRLGGDGMFRR--PPPPPPPPPSSGSPPPPPPPPPPP 114
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 701 PXXPREXPX*PQTIGPSFFXSXSPXEXXGEGFFPA*XXPPPPPGXXXFXFXGAPXSPXPP 880
P PR P T + S P G PPPPPG G P P PP
Sbjct: 899 PRVPRPPPAPSATANTASALSPPPPRPPGA------PPPPPPPGKP-----GGPPPPPPP 947
Query: 881 P 883
P
Sbjct: 948 P 948
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 892 GXXXGGXGGXRGAXKXKXXXARGGGG 815
G GG GG RG ARGGGG
Sbjct: 52 GRGRGGGGGGRGDGARDGGGARGGGG 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,491,429
Number of Sequences: 37544
Number of extensions: 530713
Number of successful extensions: 2001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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