Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_P19
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.038
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.27
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.27
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 0.82
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.5
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 29 3.3
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.6
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 25 8.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.9 bits (79), Expect = 0.038
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXGXXGG 573
GGG G GGGG G P PPPPP GGG G GG
Sbjct: 88 GGGGCGGGGGGCGGGGGCGGGCAP-------PPPPPACGGGCGGGGGGCGG 131
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXGXXGG 573
GGG G GGGG G PPPP GGG G GG
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/51 (39%), Positives = 20/51 (39%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXGXXGG 573
GGG G GGGG G PPPPP GGG G GG
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGGCAP-PPPPPACGGGCGGGGGGCGG 74
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 579 SPXPPPPLXXXXXGGGGGXFFSHXXGG 659
+P PPPP GGGGG GG
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGG 136
Score = 27.9 bits (59), Expect(2) = 0.13
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 579 SPXPPPPLXXXXXGGGGG 632
+P PPPP GGGGG
Sbjct: 53 APPPPPPACGGGCGGGGG 70
Score = 25.0 bits (52), Expect(2) = 0.13
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 618 GGGGGXFFSHXXGGXVXXLPPPP 686
GGGGG GG PPPP
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPP 116
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +3
Query: 573 PPSPXPPPP---LXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPXAXP 737
PP P PPPP L S G +PPPP L P L PP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLP 1397
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXGXXGGXXF 564
GGG G GGGG P P P GGG G GG +
Sbjct: 368 GGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGGGGGY 421
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.5 bits (68), Expect = 0.82
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 620 GGGGXFFFXXXGGXGXXPPPPPXSXXXPXXXHXP-PRGXP 736
GGGG + GG PPPPP + P P P P
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPPPADAAPAPAPAPEPEAAP 63
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPPL 602
PP LP PP P PPPP+
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPM 585
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXG 585
GGG G GG G + P PPPPP G G
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 573 PPSPXPPPPLXXXXXGGGGGXFFSHXXGG 659
PP P PPPP GGG S GG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 573 PPSPXPPPPLXXXXXGGGGGXFFSHXXGG 659
PP P PPPP GGG GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 725 GGGXEXXXGXXXXGGGGEGXNXPPXXVXKKXPPPPPXXXXXKGGGXG 585
GGG G GG G + P PPPPP G G
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 573 PPSPXPPPPLXXXXXGGGGGXFFSHXXGG 659
PP P PPPP GGG S GG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 573 PPSPXPPPPLXXXXXGGGGGXFFSHXXGG 659
PP P PPPP GGG GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 537 PPXXLPXKKKXXPP---SPXPPPPLXXXXXGGGGGXFFSHXXGG 659
P LP K + PP S P P GGGGG + S+ GG
Sbjct: 54 PSPPLPPKCECPPPTCNSCAPAPSSCGCGGGGGGGGYASYPRGG 97
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPPP 816
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 516 KKKXXXXPPXXLPXKKKXXPPSPXPPPP 599
+++ PP P PPSP PPPP
Sbjct: 168 QRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 653 GGXGXXPPPPPXSXXXPXXXHXPPRGXP 736
GG PPPPP P PPR P
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPP 161
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 561 KKXXPP--SPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPXAX 734
K+ PP SP PPPP G G G PPPP PP T P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPP 283
Query: 735 P 737
P
Sbjct: 284 P 284
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 561 KKXXPP--SPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPXAX 734
K+ PP SP PPPP G G G PPPP PP T P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPP 304
Query: 735 P 737
P
Sbjct: 305 P 305
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 561 KKXXPP--SPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPXAX 734
K+ PP SP PPPP G G G PPPP PP T P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPP 289
Query: 735 P 737
P
Sbjct: 290 P 290
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/63 (25%), Positives = 20/63 (31%)
Frame = +3
Query: 549 LPXKKKXXPPSPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPX 728
LP P PP G ++ H G + PPPP P +PP
Sbjct: 251 LPPPPPIMEEEPKDLPPGWEKHEDPQGYSYYWHVDSGTIQRQPPPPVRDVTPARSPSPPP 310
Query: 729 AXP 737
P
Sbjct: 311 LPP 313
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 618 GGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLTTPPXA 731
GGGGG + G V PPPP P P A
Sbjct: 20 GGGGGGEAGYSGGAGVEAPPPPPPADAAPAPAPEPAPA 57
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPS----PXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXP- 701
PP P + PP P PPPP G GG +PPPP P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
Query: 702 --PXXLTTPPXAXP 737
P PP + P
Sbjct: 358 AGPGMYPPPPPSRP 371
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 637 PPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 463 PPMGLPAVGAGAPPPPPPPPP 483
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPS----PXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXP- 701
PP P + PP P PPPP G GG +PPPP P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
Query: 702 --PXXLTTPPXAXP 737
P PP + P
Sbjct: 368 AGPGMYPPPPPSRP 381
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPPPPP 255
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLT 716
PP +P P PPPP+ GG +H PPPP L PP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPI------GGIAPVNAH-------GAPPPPPL--PPVGAG 245
Query: 717 TPPXAXP 737
PP P
Sbjct: 246 APPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPP 241
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLT 716
PP +P P PPPP+ GG +H PPPP L PP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPI------GGIAPVNAH-------GAPPPPPL--PPVGAG 231
Query: 717 TPPXAXP 737
PP P
Sbjct: 232 APPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP PP P PPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPP 241
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPPLXXXXXGGGGGXFFSHXXGGXVXXLPPPPXLXXPPXXLT 716
PP +P P PPPP+ GG +H PPPP L PP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPI------GGIAPVNAH-------GAPPPPPL--PPVGAG 231
Query: 717 TPPXAXP 737
PP P
Sbjct: 232 APPPPPP 238
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPPL 602
PP P PP P PPPP+
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPM 73
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP P+P PPPP
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPP 96
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 537 PPXXLPXKKKXXPPSPXPPPP 599
PP LP P+P PPPP
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPP 318
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 25.0 bits (52), Expect(2) = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 558 KKKXXPPSPXPPPP 599
+K PP P PPPP
Sbjct: 395 RKAAEPPEPTPPPP 408
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 576 PSPXPPPPL 602
P+P PPPP+
Sbjct: 403 PTPPPPPPV 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,020,252
Number of Sequences: 27780
Number of extensions: 254506
Number of successful extensions: 2559
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2091
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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