Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_P18
(940 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 189 4e-49
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 104 2e-23
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 82 1e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 55 2e-08
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 52 1e-07
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 44 2e-05
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 7e-04
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.058
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.18
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.54
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.95
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.9
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 26 6.7
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 8.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 189 bits (461), Expect = 4e-49
Identities = 83/97 (85%), Positives = 90/97 (92%)
Frame = +3
Query: 117 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 296
++++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 297 RGILTLKXPIEHGIITNWDDMEKIXHHXFYNXLXVAP 407
RGILTLK PIEHGI+ NWDDMEKI HH FYN L VAP
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP 98
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 104 bits (249), Expect = 2e-23
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = +3
Query: 123 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 302
D + +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG
Sbjct: 8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRG 67
Query: 303 ILTLKXPIEHGIITNWDDMEKIXHHXF 383
+L ++ PIE GII NW DME+I + +
Sbjct: 68 LLKIQRPIERGIIQNWSDMEEIWSYIY 94
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 82.2 bits (194), Expect = 1e-16
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +3
Query: 129 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 302
A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++ R
Sbjct: 4 APIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRS 63
Query: 303 ILTLKXPIEHGIITNWDDMEKIXHHXFYNXLXVAP 407
+L +K P+E+GII ++++M ++ + F+ L + P
Sbjct: 64 LLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP 98
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 54.8 bits (126), Expect = 2e-08
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +3
Query: 57 AAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 236
A E + + PT + F+ +D+ LV+DNGS +AG+ G+ P+ VF ++V R R +
Sbjct: 5 AVREPVFSGPTPS---FQNVSNDIP-LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR 60
Query: 237 GVMVGMGQKDSYVGDEAQSKRGILTL-KXPIEHGIITNWDDMEKIXHHXF 383
+ + + VG++ + G ++ + P E +I+NWD ME++ + F
Sbjct: 61 ----KLSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTF 106
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 52.0 bits (119), Expect = 1e-07
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Frame = +3
Query: 135 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 263
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 264 ------DSYVGDEAQSKRGI-LTLKXPIEHGIITNWDDMEKIXHHXFYNXLXVAP 407
D ++G++A K +L PI HG I NWD ME+ + L P
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEP 121
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 120 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 299
D+V+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 300 GILTLKXPIEHGIITNWD 353
G + +K I +G + NWD
Sbjct: 62 G-MEIKNAIRNGWVENWD 78
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 120 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 299
+++ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 300 GI--LTLKXPIEHGIITNWD 353
I + +K +GII +W+
Sbjct: 62 PIPGMEVKNGKSNGIIQDWE 81
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 7e-04
Identities = 29/114 (25%), Positives = 37/114 (32%), Gaps = 1/114 (0%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSPLX 714
P P PS PP P +++ +PA PP PS V A + S
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPS---VAAPPVPVPSGAPPVPKPSVAA 1149
Query: 715 XPXTLHFKNPPXXTPPXPXPP-PXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXP 873
P PP P PP P + PP+ +PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 34.3 bits (75), Expect = 0.025
Identities = 31/114 (27%), Positives = 40/114 (35%), Gaps = 3/114 (2%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLP--AXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSP 708
P P PS PP P + +P A G PP P P V + P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV----------PKPSVGVPP 1209
Query: 709 LXXPXTLHFKNPPXXTPPXPXPP-PXXXNXXPPLXSNTXXPXXXXSLXTSPPSP 867
+ P T PP TP PP P PP+ + + + +S PSP
Sbjct: 1210 VPPPSTA----PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 33.9 bits (74), Expect = 0.033
Identities = 25/108 (23%), Positives = 34/108 (31%), Gaps = 1/108 (0%)
Frame = +1
Query: 562 PPXXTPRLSLXXLPAX-GXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSPLXXPXTLHFK 738
PP P + +PA G PP P P V + P+ P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA--- 1120
Query: 739 NPPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXPXXA 882
PP P PP + PP+ + + +PP P P A
Sbjct: 1121 -PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Score = 33.5 bits (73), Expect = 0.044
Identities = 29/115 (25%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSX--PXVTAXXXXXXXXXREFXRXSP 708
P P PS PP P ++ +P PP PS P V A + P
Sbjct: 1113 PVPAPSGA-PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP-KPSVAAPP 1170
Query: 709 LXXPXTLHFKNPPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXP 873
+ P + PP P PP + PP+ + T+PP P P
Sbjct: 1171 VPAPSS---GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 32.3 bits (70), Expect = 0.10
Identities = 27/114 (23%), Positives = 31/114 (27%), Gaps = 1/114 (0%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPR-LSLXXLPAXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSPL 711
P P PS PP P P+ PP P P V P+
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 712 XXPXTLHFKNPPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXP 873
P PP P P P PP+ + P PP P P
Sbjct: 1182 PKPAA---GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 29.9 bits (64), Expect = 0.54
Identities = 26/112 (23%), Positives = 34/112 (30%)
Frame = +1
Query: 547 PSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSPLXXPXT 726
P PP P L + + + PP P R P+
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKD-HPPSAPLSKPVSTSPAAPLARVPPVPK--- 1016
Query: 727 LHFKNPPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXPXXA 882
L K PP P PP + PP+ T P S +P +P P A
Sbjct: 1017 LSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/117 (22%), Positives = 31/117 (26%), Gaps = 1/117 (0%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLPAXGXPPP-PXXPSXPXVTAXXXXXXXXXREFXRXSPL 711
P P S PP P +P PP P S P V S
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 712 XXPXTLHFKNPPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXPXXA 882
PP P P P PP+ + + +PP P P A
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.1 bits (72), Expect = 0.058
Identities = 29/103 (28%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Frame = +1
Query: 523 PVXLPXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRX 702
P + P PS P P SL P+ PPPP P P ++
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSL---PSDYNPPPPPPP--PPAVEDQAADANEPDDYYSS 215
Query: 703 SPLXXPXTLHFKNPPXXTP----PXPXPPPXXXNXXPPLXSNT 819
P PP TP P P PPP PP +NT
Sbjct: 216 GRAVSPEI-----PPTYTPKQADPLPAPPPPPPPTLPPQSTNT 253
Score = 29.5 bits (63), Expect = 0.72
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 803 PXXPTPXXPXXSXPLXPPXPPPPP 874
P P P + PL P PPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 180 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKXP 323
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +2
Query: 701 SPXFXPXXPFTSKTPPXXRXLXPXLPXXXXTXPXPXXPTPXXPXXSXPLXPPXPPPP 871
SP P P SK PP L P P P+ P P+ P PPPP
Sbjct: 153 SPASAP--PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS--LPSAVPPMPPKVPPPP 205
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 745 PXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPS 864
P PP P P + PP+ S+ P + SPPS
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 742 PPXXTPPXPXPPPXXXNXXPPLXSNTXXPXXXXSLXTSPPSPXP 873
PP PP P PP PP+ S P SL PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKA--PPIPSSL---PPPAQP 177
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.54
Identities = 28/112 (25%), Positives = 34/112 (30%), Gaps = 1/112 (0%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXVTAXXXXXXXXXREFXRXSPLX 714
P P P P L A PP P P+ P +A P+
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP-PAIPGRSAPALPPLGNASR-TSTPPVP 418
Query: 715 XPXTLHFKNPPXXTPPXPXPPPXXXNXXPPL-XSNTXXPXXXXSLXTSPPSP 867
P +L PP P P P PPL S P + +PP P
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 704 PXFXPXXP--FTSKTPPXXRXLXPXLPXXXXTXPXPXXPTPXXPXXSXPLXPPXPPPPP 874
P P P PP P P + P P P + PL P P PPP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPLPPAAPAPPP 478
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.95
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 797 PXPXXPTPXXPXXSXPLXPPXPPPP 871
P P P P P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 513 PXXSRXPPXPXPLXRTASXXYPPPXPG 593
P + PP P P S PPP PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 576 PPPXPGXXPXXWXPPP 623
PPP PG P PPP
Sbjct: 12 PPPPPGFEPPSQPPPP 27
Score = 23.0 bits (47), Expect(2) = 9.3
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 739 NPPXXTPPXPXPPPXXXNXXPP 804
NPP PP PP PP
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPP 29
Score = 20.6 bits (41), Expect(2) = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 598 LPAXGXPPPPXXP 636
LP PPPP P
Sbjct: 4 LPPGNPPPPPPPP 16
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 523 PVXLPXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXVTA 657
P+ +P P P PP P + G PPPP P P V+A
Sbjct: 748 PIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPP--PPPPAVSA 787
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +1
Query: 475 MTPDSXSTXFNSXRXXPVXLPXPXPSXVRP-PXXTPRLSLXXLPAXGXPPPPXXP 636
+ PD T + P P P+ + P P P P G PPPP P
Sbjct: 713 LLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +2
Query: 734 SKTPPXXRXLXPXLPXXXXTXPXPXX-----PTPXXPXXSXPLXPPXPPPPP 874
S PP + P P P P P P PP PPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 812 PTPXXPXXSXPLXPPXPPPPP 874
P P P + PP PPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 534 PXPXPLXRTASXXYPPPXPGXXPXXWXPPPXXXPLXXXG 650
P P P PPP PG PPP P G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 767 PXLPXXXXTXPXPXXPTPXXPXXSXPLXPPXPPPPPXG 880
P P P P P P P PP PPPPP G
Sbjct: 734 PPPPAVIVPTPAPA-PIPVPPPAPIMGGPP-PPPPPPG 769
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 797 PXPXXPTPXXPXXSXPLXPPXPPPPPXG 880
P PTP P S P PP PP P G
Sbjct: 1700 PQMSAPTPPPPPMSVP-PPPSAPPMPAG 1726
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Frame = +2
Query: 740 TPPXXRXLXPXLPXXXXTXPXPXXPTPXXPXXSX-PLXPPXPPPPP 874
TPP T P P P P P PP PPPP
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 535 PXPXPSXVRPPXXTPRLSLXXLPAXGXPPPPXXPSXPXV 651
P P P V PP P + P PPP S P V
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAG--PPSAPPPPLPASSAPSV 1743
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 797 PXPXXPT-PXXPXXSXPLXPPXPPPPP 874
P P P+ P P P+ P PP PP
Sbjct: 154 PVPKKPSKPSKPRKKVPVSHPLPPTPP 180
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 812 PTPXXPXXSXPLXPPXPPPPP 874
PT P S P P PPPP
Sbjct: 402 PTSNVPAYSTPARPTESPPPP 422
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,581,670
Number of Sequences: 5004
Number of extensions: 45093
Number of successful extensions: 330
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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