Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P17
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0129 + 41243686-41243853,41243936-41244053,41245485-412455...   101   8e-22
01_01_0347 + 2765517-2767109,2767214-2767228                           30   3.0  
07_01_0516 - 3850252-3852870                                           28   9.2  
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093...    28   9.2  
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983     28   9.2  

>01_07_0129 +
           41243686-41243853,41243936-41244053,41245485-41245532,
           41245756-41245787
          Length = 121

 Score =  101 bits (242), Expect = 8e-22
 Identities = 46/101 (45%), Positives = 65/101 (64%)
 Frame = +2

Query: 167 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLXYYLSGLTCXEQ 346
           +L+  S  K+FGG+   + H S+ L C M FS++LPP        LP+ Y+LSGLTC ++
Sbjct: 13  ALEQMSRTKMFGGHNLRFRHHSATLGCPMTFSVFLPPSPASD---LPVLYWLSGLTCNDE 69

Query: 347 NFITKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXG 469
           NF+TK+G Q  AA HG+ +V PDTSP  + I+ +  SWD G
Sbjct: 70  NFVTKAGAQRAAAAHGIALVAPDTSPRGLNIEGEADSWDFG 110


>01_01_0347 + 2765517-2767109,2767214-2767228
          Length = 535

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 839 SXFPHPPXTHLAXNXXPTPPPPXH 910
           S  P PP  +L  +  P+PPPP H
Sbjct: 69  SAHPGPPDINLPLSADPSPPPPPH 92


>07_01_0516 - 3850252-3852870
          Length = 872

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 848 PHPPXTHLAXNXXPTPPPPXHFXAXP 925
           P PP T       P PPPP H  + P
Sbjct: 17  PQPPPTSRPLPPPPPPPPPAHGPSPP 42


>01_06_1670 -
           39007402-39008229,39008320-39008567,39009159-39009364,
           39009454-39011054
          Length = 960

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
 Frame = +2

Query: 734 RXRPPXASXPXXTX--NSXXXXXRMXXXXXLTKXPWTSXFPHPPXTHLAXNXXPTPPPP 904
           R +PP  S P      N+            + + P+    P PP TH      P PPPP
Sbjct: 374 RRKPPSPSPPSSPLIENTSALRSTTTTDTTIPRNPFVQ--PPPPPTHTHGPPPPPPPPP 430


>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
          Length = 448

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 903 GGGGVGXXLXARXVXGGWGKXEVQGXLVKGGCGG 802
           GG G    L A    GG G+    G L++GGCGG
Sbjct: 5   GGAGEDGALPASGDCGGGGE---DGGLLEGGCGG 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,109
Number of Sequences: 37544
Number of extensions: 381776
Number of successful extensions: 1509
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)