Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P17
         (930 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB...   125   8e-29
AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p pro...   124   2e-28
AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA...   124   2e-28
AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p pro...    30   5.2  

>AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB,
           isoform B protein.
          Length = 330

 Score =  125 bits (302), Expect = 8e-29
 Identities = 62/135 (45%), Positives = 81/135 (60%)
 Frame = +2

Query: 125 NIIFPEAHQKSNMDSLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKL 304
           +I+    H  +   +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    
Sbjct: 32  SIVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PC 90

Query: 305 PLXYYLSGLTCXEQNFITKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXGXSAXF 484
           P+ ++LSGLTC  +NFI KSGFQ +AA H +IVV PDTSP  V I   D ++D G  A F
Sbjct: 91  PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 150

Query: 485 YXXATPEPXNXNYXM 529
           Y  A  EP + +Y M
Sbjct: 151 YVDAKEEPWSKHYKM 165


>AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p
           protein.
          Length = 286

 Score =  124 bits (298), Expect = 2e-28
 Identities = 60/121 (49%), Positives = 76/121 (62%)
 Frame = +2

Query: 167 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLXYYLSGLTCXEQ 346
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+ ++LSGLTC  +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 347 NFITKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXGXSAXFYXXATPEPXNXNYX 526
           NFI KSGFQ +AA H +IVV PDTSP  V I   D ++D G  A FY  A  EP + +Y 
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 527 M 529
           M
Sbjct: 121 M 121


>AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA,
           isoform A protein.
          Length = 286

 Score =  124 bits (298), Expect = 2e-28
 Identities = 60/121 (49%), Positives = 76/121 (62%)
 Frame = +2

Query: 167 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLXYYLSGLTCXEQ 346
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+ ++LSGLTC  +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 347 NFITKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXGXSAXFYXXATPEPXNXNYX 526
           NFI KSGFQ +AA H +IVV PDTSP  V I   D ++D G  A FY  A  EP + +Y 
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 527 M 529
           M
Sbjct: 121 M 121


>AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p
           protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 338 YKLDQTNNXEVVIS-HHPLLPEGGDR*KNSFCILIQMMHENTLFDNHQKFYWTILI 174
           Y+  QT    V +   HPLL  GGD  ++ +      + + + F+  +KF + IL+
Sbjct: 427 YQQQQTTQLPVQLQLQHPLLQTGGDGKQSVYAPPTVQLRKQSRFNARKKFQFAILV 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,065,811
Number of Sequences: 53049
Number of extensions: 604994
Number of successful extensions: 1888
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1848
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)