Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P17
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical ...   126   2e-29
AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical...   126   2e-29
Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  126 bits (304), Expect = 2e-29
 Identities = 61/118 (51%), Positives = 73/118 (61%)
 Frame = +2

Query: 176 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLXYYLSGLTCXEQNFI 355
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP  +YLSGLTC   NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 356 TKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXGXSAXFYXXATPEPXNXNYXM 529
            KSGFQ +A+ H ++VV PDTSP  V +D D  SWD G  A FY  AT E    NY M
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRM 120


>AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  126 bits (304), Expect = 2e-29
 Identities = 61/118 (51%), Positives = 73/118 (61%)
 Frame = +2

Query: 176 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLXYYLSGLTCXEQNFI 355
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP  +YLSGLTC   NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 356 TKSGFQXYAAXHGVIVVGPDTSPPXVXIDXDDSSWDXGXSAXFYXXATPEPXNXNYXM 529
            KSGFQ +A+ H ++VV PDTSP  V +D D  SWD G  A FY  AT E    NY M
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRM 120


>Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical
           protein T16G1.5 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 162 WTACN*NRPIKFLVVIKKCILMHHL 236
           WT  N N P K ++ +  CI +HHL
Sbjct: 65  WTIPNENLPEKIILKLTSCINVHHL 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,613,635
Number of Sequences: 27780
Number of extensions: 285071
Number of successful extensions: 805
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)