Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P16
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 219 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 395
           I+ PT      ++    NIE S D  +N+D+ K +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 396 EAVKVFRV 419
             VKV RV
Sbjct: 332 SRVKVMRV 339


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 479 STEACSSTLLLXRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 616
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/76 (27%), Positives = 32/76 (42%)
 Frame = +2

Query: 365 LRPHQRAPNGRSRQSLPSPTTLRTSMFS*GLRAG*EKGSTEACSSTLLLXRASTEPTARV 544
           +RP    P+  S Q  P P+T + +     + A      T +  S       ST  TA  
Sbjct: 518 IRPRPVVPSDESEQEAPGPSTDQVTSEEQEIPA------TSSAPSIFRTESPSTSSTAPS 571

Query: 545 STCPLLTRSIPTSSLT 592
           ++ P+   S PT+S T
Sbjct: 572 TSSPVTASSTPTTSST 587


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,095,620
Number of Sequences: 27780
Number of extensions: 344433
Number of successful extensions: 759
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)