Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P11
         (1005 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          27   4.8  
Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        27   8.2  
L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1...    27   8.2  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    27   8.8  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 27.5 bits (58), Expect(2) = 4.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 669 PPXPXXXXPPPPPP 710
           PP P    PPPPPP
Sbjct: 75  PPPPPPQQPPPPPP 88



 Score = 22.6 bits (46), Expect(2) = 4.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 693 PPPPPPL 713
           PPPPPPL
Sbjct: 101 PPPPPPL 107


>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 27.5 bits (58), Expect(2) = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 669 PPXPXXXXPPPPPP 710
           PP P    PPPPPP
Sbjct: 575 PPLPPGAPPPPPPP 588



 Score = 21.8 bits (44), Expect(2) = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 693 PPPPPPL 713
           PPPPPP+
Sbjct: 601 PPPPPPM 607


>L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1
           protein.
          Length = 639

 Score = 27.5 bits (58), Expect(2) = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 669 PPXPXXXXPPPPPP 710
           PP P    PPPPPP
Sbjct: 575 PPLPPGAPPPPPPP 588



 Score = 21.8 bits (44), Expect(2) = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 693 PPPPPPL 713
           PPPPPP+
Sbjct: 601 PPPPPPM 607


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 27.5 bits (58), Expect(2) = 8.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 669 PPXPXXXXPPPPPP 710
           PP P    PPPPPP
Sbjct: 201 PPLPPGAPPPPPPP 214



 Score = 21.8 bits (44), Expect(2) = 8.8
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 693 PPPPPPL 713
           PPPPPP+
Sbjct: 227 PPPPPPM 233


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,506,518
Number of Sequences: 237096
Number of extensions: 987276
Number of successful extensions: 29584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20844
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13433848218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)