Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_P07
(917 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 1.9
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 23 3.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.4
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 23 4.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 4.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.8
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 5.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 5.8
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 7.7
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 894 PPPPPPP 914
PPPPPPP
Sbjct: 731 PPPPPPP 737
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 858 PPPPXXXXXSXLPPPPP 908
PP S +PPPPP
Sbjct: 202 PPTEDCDVPSTIPPPPP 218
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 855 PPPPPXXXXXSXLPPPPP 908
PPPPP S +P P
Sbjct: 214 PPPPPEEDDDSNIPQNNP 231
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 209 IYTEANSSFFGERQTNIIL*MMGLC 135
+Y A+ F G QTN+++ G C
Sbjct: 92 MYNSADEGFDGTFQTNVVVKHNGSC 116
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 209 IYTEANSSFFGERQTNIIL*MMGLC 135
+Y A+ F G QTN+++ G C
Sbjct: 92 MYNSADEGFDGTFQTNVVVKHNGSC 116
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/46 (28%), Positives = 14/46 (30%), Gaps = 2/46 (4%)
Frame = +2
Query: 410 YSSKKNXXTPPPXXPPPX--PXXXXPXXPXPPXPXPPPXXPXXXXP 541
Y + P P PP P PP P PP P P
Sbjct: 151 YEPNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAPTMINP 196
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/46 (28%), Positives = 14/46 (30%), Gaps = 2/46 (4%)
Frame = +2
Query: 410 YSSKKNXXTPPPXXPPPX--PXXXXPXXPXPPXPXPPPXXPXXXXP 541
Y + P P PP P PP P PP P P
Sbjct: 151 YEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 209 IYTEANSSFFGERQTNIIL*MMGLC 135
+Y A+ F G QTN+++ G C
Sbjct: 92 MYNSADEGFDGTFQTNVVVKHGGSC 116
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 209 IYTEANSSFFGERQTNIIL*MMGLC 135
+Y A+ F G QTN+++ G C
Sbjct: 92 MYNSADEGFDGTFQTNVVVKHGGSC 116
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 209 IYTEANSSFFGERQTNIIL*MMGLC 135
+Y A+ F G QTN+++ G C
Sbjct: 92 MYNSADEGFDGTFQTNVVVKHGGSC 116
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 852 PPPPPPXXXXXSXLPPPPPPP 914
PP P P S P PP P
Sbjct: 250 PPTPKPRPTKVSRRKPRPPRP 270
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 161 CLFVFRQKSYYLLLCIFCNY*CKMLFLIVLRKCQYY 268
C F+ LLCI+ Y C ++ L+ C YY
Sbjct: 270 CAFIIFTMHLLFLLCIYYFY-CALIILL----CIYY 300
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 596 PPTNPXPPXXXPXPPPPP 649
PP+ PP P P PP
Sbjct: 68 PPSGGQPPQGMPYPRFPP 85
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,007
Number of Sequences: 336
Number of extensions: 5190
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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