Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_P06
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    33   0.27 
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    33   0.27 
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    33   0.27 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   1.9  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   1.9  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   1.9  
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily a...    29   4.4  
AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily a...    29   4.4  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    29   5.8  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    28   7.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    28   7.7  

>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 738 PLPHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPPRXTXXSXXLPXP 881
           P P  SPP   PP     P P   P  G   PP PPR +  +  LP P
Sbjct: 274 PPPTGSPP---PPPAGGSPPP---PRAGSPPPPPPPRGSPPTGSLPPP 315


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 738 PLPHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPPRXTXXSXXLPXP 881
           P P  SPP   PP     P P   P  G   PP PPR +  +  LP P
Sbjct: 295 PPPTGSPP---PPPAGGSPPP---PRAGSPPPPPPPRGSPPTGSLPPP 336


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 738 PLPHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPPRXTXXSXXLPXP 881
           P P  SPP   PP     P P   P  G   PP PPR +  +  LP P
Sbjct: 280 PPPTGSPP---PPPAGGSPPP---PRAGSPPPPPPPRGSPPTGSLPPP 321


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           P   PP   PP+    P P   P  GG  PP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPP--PPPPGGCPPPPPP 774


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           P   PP   PP+    P P   P  GG  PP PP
Sbjct: 743 PPPPPPGGLPPISGGPPPP--PPPPGGCPPPPPP 774


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           P   PP   PP+    P P   P  GG  PP PP
Sbjct: 326 PPPPPPGGLPPISGGPPPP--PPPPGGCPPPPPP 357


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           P +  P   PP R   PSP   P      PP PP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 493


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           P +  P   PP R   PSP   P      PP PP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500


>AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform b protein.
          Length = 774

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPPRXTXXSXXLP 875
           P  SPP+  PPL      PL  P      PP PP+ T     +P
Sbjct: 69  PTESPPLPPPPL------PLSNPPAKPTPPPPPPKPTIRPPPIP 106


>AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform a protein.
          Length = 996

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 744 PHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPPRXTXXSXXLP 875
           P  SPP+  PPL      PL  P      PP PP+ T     +P
Sbjct: 291 PTESPPLPPPPL------PLSNPPAKPTPPPPPPKPTIRPPPIP 328


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 412 TQRR*YGYPQNXGIXXERXCEPKASQRPXTVQRP 513
           T RR Y YP    +      EP++++RP T + P
Sbjct: 225 TTRRPYPYPSFEVLPHHEEYEPRSTRRPTTTEEP 258


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 732 LAPLPHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           +AP+  ++PP   PP     P P+  P  G   PP PP
Sbjct: 622 MAPISSAAPP---PP---PPPPPMGLPAVGAGAPPPPP 653


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 732 LAPLPHSSPPVXYPPLRXXXPSPLXXPXXGGXXPPKPP 845
           +AP+  ++PP   PP     P P+  P  G   PP PP
Sbjct: 448 MAPISSAAPP---PP---PPPPPMGLPAVGAGAPPPPP 479


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,853,603
Number of Sequences: 27780
Number of extensions: 234030
Number of successful extensions: 851
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)