Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O22
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0530 - 4567481-4569043                                           31   1.6  
08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    30   2.1  
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653...    28   8.7  

>05_01_0530 - 4567481-4569043
          Length = 520

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -2

Query: 503 FGSPALPPFXLFQVN--SSLGXFHWPSLDDH 417
           F  P LP       N  SSLG FHWP L+ H
Sbjct: 176 FDVPDLPAPRAVTTNRASSLGLFHWPGLESH 206


>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 315 TTFTKKSLVXLSQSPEDLPSPHFLVPSDKVV 223
           TTF +++    S +PE+LP P  ++  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>02_04_0640 -
           24664841-24664855,24664895-24664978,24665232-24665319,
           24665457-24667318
          Length = 682

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 136 QVSMPPGLRXEVSRSPXKFSKSV*HPXDIHDFVTWDKEMGGGKVFGTLGEXDQG 297
           Q   PPGLR ++ ++     K   HP  +  +  W  E+GG  VFG + E   G
Sbjct: 597 QCPSPPGLRPQLRQTRSLLEKP--HPR-MAVYRKWGGELGGKYVFGGILEKVNG 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,022,807
Number of Sequences: 37544
Number of extensions: 329128
Number of successful extensions: 644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)