Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O21
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0931 - 28912700-28913056,28913245-28913319,28913424-289134...    31   0.96 
08_01_0134 + 1067826-1068158                                           30   2.9  
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158     29   5.1  
12_02_0289 - 16914975-16916238,16916246-16916484                       29   6.7  
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449...    28   8.9  
01_01_0387 + 2999222-2999495,2999834-2999934                           28   8.9  

>03_05_0931 -
           28912700-28913056,28913245-28913319,28913424-28913497,
           28913604-28913691,28913785-28913936,28914050-28914209,
           28914303-28914458,28914566-28914784,28915390-28915650,
           28917183-28917389,28917488-28917619
          Length = 626

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 365 AAERIYGXPGLPFTWPGPSRRSTGYSPA 448
           AAE +YG P +  +WPGP   S G + A
Sbjct: 5   AAELLYGMPAMRLSWPGPDGISGGGAEA 32


>08_01_0134 + 1067826-1068158
          Length = 110

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 649 RPRSF*VESRSEMXQPVDGSQPCRDGPCQPCGXSKGSTPRRTR 521
           R  S  ++ R +M +   GS+ C D   + CG SKG  P R++
Sbjct: 66  RQSSIRLQERFKMVET--GSKTCADSKAKVCGSSKGLIPTRSK 106


>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
          Length = 974

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 688 GSMRGAVRFGDGGRPRSF*V-ESRSEMXQPVDGSQPCRDGPCQPCGXSKGSTPRRTR 521
           G++R + R  +G  P S    E + +  + + G++PCR     P   S    PRR+R
Sbjct: 338 GAVRASSRRPEGAVPTSQPEGERKKKRLRKMGGTEPCRGNLISPSRWSFSRPPRRSR 394


>12_02_0289 - 16914975-16916238,16916246-16916484
          Length = 500

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 198 PSKKARFWAVLRAFSKGSERHQSRGK 275
           P+KK      LRAF KG E H   GK
Sbjct: 209 PAKKVEIMDDLRAFQKGKEYHSKVGK 234


>05_05_0239 -
           23543592-23544293,23544482-23544634,23544737-23544922,
           23544951-23545097,23545274-23545411,23545527-23545727
          Length = 508

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 235 RSLKVRKDIRAEERYRPTRRSVFPETPVELPFTP 336
           RSLK + D+ A     PTRRS+  E  V+ P TP
Sbjct: 409 RSLKEKADVDAPPETPPTRRSL-KEADVDEPDTP 441


>01_01_0387 + 2999222-2999495,2999834-2999934
          Length = 124

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 565 GXDHLDRAGCHRPAVPSRYGTLPKRTGAYPHH 660
           G  +   AG    A P ++G  P + GAYP H
Sbjct: 45  GHGYPPHAGAAHGAYPPQHGAYPPQHGAYPGH 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,376,319
Number of Sequences: 37544
Number of extensions: 503670
Number of successful extensions: 1424
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)