Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O21
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    28   0.13 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.7  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   5.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   5.1  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   8.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   8.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   8.9  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 216 FWAVLRAFSKGSERHQSRGKVQANTPQRFS 305
           FW++ +AF++    + S GK+ A  P  FS
Sbjct: 332 FWSLRKAFARKKTDYSSFGKILATEPTLFS 361


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 391 GXPVNPLSGSDRVLRKSTL 335
           G PVN + G  RVLR  TL
Sbjct: 69  GHPVNDVPGVRRVLRNGTL 87


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 391 GXPVNPLSGSDRVLRKSTL 335
           G PVN + G  RVLR  TL
Sbjct: 69  GHPVNDVPGVRRVLRNGTL 87


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 818 GXNSXRLXKWSFDTRISPASSCSPVGPWXSGSYSMPXRLLG 696
           G N+ ++ K +F   ISPA       PW    +S    + G
Sbjct: 62  GQNTYKVAKGAFTGEISPAMLLDNGIPWVILGHSERRNIFG 102


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 375 GFTGXPGYRLPGLVHRE 425
           GF G PGY  P ++ +E
Sbjct: 71  GFAGTPGYLSPEVLKKE 87


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 280 RPTRRSVFPETPVELPFTPKSIYEEPY 360
           +P RR  FP  P + PF PK  + + Y
Sbjct: 28  QPGRRP-FPTFPGQGPFNPKIKWPQGY 53


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 154 NVQNTFRHDWAETRRRRRKPDFG 222
           +VQ TFR  W + R R    DFG
Sbjct: 81  SVQLTFREQWLDERLRFN--DFG 101


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 154 NVQNTFRHDWAETRRRRRKPDFG 222
           +VQ TFR  W + R R    DFG
Sbjct: 81  SVQLTFREQWLDERLRFN--DFG 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,373
Number of Sequences: 438
Number of extensions: 4254
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)