Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_O18
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.055
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.055
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.055
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.072
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.072
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.29
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.2
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 31 1.2
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 31 1.2
Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 31 1.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.8
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.3
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 8.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.3
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.055
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP PP T PP P L G P P PP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXX 856
P P P P P + PP PP + PP P PG
Sbjct: 721 PITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPP------PGGCPPP 771
Query: 857 PXPPXPXAXXXTPPPP 904
P PP P PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.055
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP PP T PP P L G P P PP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXX 856
P P P P P + PP PP + PP P PG
Sbjct: 721 PITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPP------PGGCPPP 771
Query: 857 PXPPXPXAXXXTPPPP 904
P PP P PPPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.055
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP PP T PP P L G P P PP PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXX 856
P P P P P + PP PP + PP P PG
Sbjct: 304 PITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPP------PGGCPPP 354
Query: 857 PXPPXPXAXXXTPPPP 904
P PP P PPPP
Sbjct: 355 PPPPPPGGFKGGPPPP 370
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.072
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 632 PPHXXXTXAGXFRTHPXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTP 811
PP +G +P P P P+ P + P PP PP P
Sbjct: 246 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPP-PMPPTPGMTPRPPPPP--SSGMWPPPPPP 302
Query: 812 XASTLTXFPGFPGXXPXPP----XPXAXXXTPPPP 904
PG PG P PP P PPPP
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/86 (29%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHR--QPPTPXASTLTXFPGFPG 850
P P P P P S PP PP PP P S PG G
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGG 332
Query: 851 XXPXPPXPXAXXX-TPPPPXXXHTAA 925
P PP PPPP + +A
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSA 358
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 800 PPTPXASTLTX-FPGFPGXXPXPPXPXAXXX--TPPPPXXXHT 919
PP P + + P PG P PP P + PPPP T
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 307
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.072
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 632 PPHXXXTXAGXFRTHPXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTP 811
PP +G +P P P P+ P + P PP PP P
Sbjct: 256 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPP-PMPPTPGMTPRPPPPP--SSGMWPPPPPP 312
Query: 812 XASTLTXFPGFPGXXPXPP----XPXAXXXTPPPP 904
PG PG P PP P PPPP
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/86 (29%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHR--QPPTPXASTLTXFPGFPG 850
P P P P P S PP PP PP P S PG G
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGG 342
Query: 851 XXPXPPXPXAXXX-TPPPPXXXHTAA 925
P PP PPPP + +A
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSA 368
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 800 PPTPXASTLTX-FPGFPGXXPXPPXPXAXXX--TPPPPXXXHT 919
PP P + + P PG P PP P + PPPP T
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 317
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQPPTPXASTLTXFP-GFPGXXPXPP---XPXAXXXTPPPP 904
PP PP T PP P T++ P G P P PP P PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 24.2 bits (50), Expect(2) = 6.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 891 PPPPPPXXTXRLSP 932
PPPPPP + L+P
Sbjct: 1341 PPPPPPPPSDDLTP 1354
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 861 RPRXPXXXXEPPPPPP 908
R P PPPPPP
Sbjct: 1332 RSSSPSPPPPPPPPPP 1347
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 785 TTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
+T+ PP P G P P PP A PPPP
Sbjct: 516 STNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXX 856
P P P P LPP P +T +P S + P P
Sbjct: 258 PMPQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPS 317
Query: 857 PXPPXPXAXXXTPPPP 904
PP P A PPPP
Sbjct: 318 IPPPRPPA--LAPPPP 331
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXX 856
P P P P LPP P +T +P S + P P
Sbjct: 258 PMPQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPS 317
Query: 857 PXPPXPXAXXXTPPPP 904
PP P A PPPP
Sbjct: 318 IPPPRPPA--LAPPPP 331
>Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical
protein T23G11.7b protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 788 THRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPP 901
++ QPP P P P PP P A PPP
Sbjct: 192 SYNQPPAPGFGFGGGIPNVPSDHSLPPQPPARNNIPPP 229
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQP----PTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP PP H P P P +P G P PP P PPPP
Sbjct: 55 PPPSLPPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 741 ANCPPXRXPPPXXXKQPTVNHXXXXXXXXXXXXGSXXXXRRPRXPXXXXEPPPPPP 908
++ PP PPP +PT+ H S P P PPPPPP
Sbjct: 762 SSIPPPPPPPPPPHCEPTMVHVEFTPPST----SSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 741 ANCPPXRXPPPXXXKQPTVNHXXXXXXXXXXXXGSXXXXRRPRXPXXXXEPPPPPP 908
++ PP PPP +PT+ H S P P PPPPPP
Sbjct: 762 SSIPPPPPPPPPPHCEPTMVHVEFTPPST----SSVPPPPPPLPPISSGAPPPPPP 813
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 800 PPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP P S + P G P PP P PPPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIP-PPPPLGIIPPPPPP 804
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/118 (26%), Positives = 35/118 (29%), Gaps = 1/118 (0%)
Frame = +2
Query: 572 PTXTVPXPXXXPFSEG*XXXPPHXXXTXAGXFRTHPXNXKPXPKKNPLXXGPXSXXRQLP 751
P VP P P P H A ++P N P P P + P
Sbjct: 58 PQQAVPAPAPPP-----APYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAP 112
Query: 752 PXXXPPX*XXXTTHRQP-PTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPPXXXHTA 922
P P H P P P P P P PP PPPP H+A
Sbjct: 113 PPAPYPQ------HAVPAPAPYQQQPPPPPPPPHYPPPPPH------YPPPPPAPHSA 158
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 800 PPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP P S + P G P PP P PPPP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIP-PPPPLGIIPPPPPP 804
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 731 SXXRQLPPXXX-PPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
S +Q PP PP P P + P PG P PP A PPPP
Sbjct: 41 SVTKQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 752 PXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
P PP PP P + P G P PP P P PP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 800 PPTPXASTLTXFPGFPGXX-PXPPXPXAXXXTPPPP 904
PP P AS P P PP P A PPPP
Sbjct: 91 PPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Frame = +2
Query: 677 PXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQP-PTPXASTLTXFPGFPGX 853
P P K P+ GP S PP P + P P+P + ++ P P
Sbjct: 443 PPPSAPPTIKFPISTGP-SYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
Query: 854 XPXPPXPXAXXXTPPPP 904
P P + PPPP
Sbjct: 502 LPPIATPSSVPPPPPPP 518
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/90 (23%), Positives = 25/90 (27%)
Frame = +2
Query: 632 PPHXXXTXAGXFRTHPXNXKPXPKKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTP 811
PP T T P P P P P P + PP P
Sbjct: 444 PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP 503
Query: 812 XASTLTXFPGFPGXXPXPPXPXAXXXTPPP 901
+T + P P P PP + PP
Sbjct: 504 PIATPSSVPPPPPPPPPPPPALEQEISGPP 533
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 731 SXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFP-GFPGXXPXPPXPXAXXXTPPPP 904
S +P PP + PP P P G P PP P PPPP
Sbjct: 192 SAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 250
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 7/72 (9%)
Frame = +2
Query: 725 PXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPP-------XPXAX 883
P PP PP + PTP A P + G PP P A
Sbjct: 221 PGGRPGSTPPATFPPGSVSTVRYTPGPTPPAPWTYTVPPYSGYRTIPPVYNHYETVPPAA 280
Query: 884 XXTPPPPXXXHT 919
TP PP T
Sbjct: 281 QTTPQPPCTPRT 292
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 731 SXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFP-GFPGXXPXPPXPXAXXXTPPPP 904
S +P PP + PP P P G P PP P PPPP
Sbjct: 178 SAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 731 SXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFP-GFPGXXPXPPXPXAXXXTPPPP 904
S +P PP + PP P P G P PP P PPPP
Sbjct: 178 SAGSSIPHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 836 PGFPGXXPXPPXPXAXXXTPPPP 904
PG PG P PP P PPPP
Sbjct: 710 PGIPGYPPAPPPPGVG---PPPP 729
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 575 TXTVPXPXXXPFSEG*XXXPPHXXXTXAGXFRTHPXNXKPXPKKNPLXXGP-XSXXRQLP 751
T TVP P +E PP RT P +P P + P P + + P
Sbjct: 363 TTTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEP 422
Query: 752 PXXXPP 769
P PP
Sbjct: 423 PTTEPP 428
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 749 PPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXAXXXTPPPP 904
PP PP P P P P P PP P PPPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/68 (27%), Positives = 23/68 (33%)
Frame = +2
Query: 701 KKNPLXXGPXSXXRQLPPXXXPPX*XXXTTHRQPPTPXASTLTXFPGFPGXXPXPPXPXA 880
+ P+ GP Q PP P H+Q + G PG P P A
Sbjct: 148 RPGPVTNGPPPQG-QYPPPPQAPQNYQQMYHQQRAQQQQAGQQQAQGPPGYGPYGYAPQA 206
Query: 881 XXXTPPPP 904
PPPP
Sbjct: 207 STGYPPPP 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,088,157
Number of Sequences: 27780
Number of extensions: 203284
Number of successful extensions: 2008
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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