Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_O12
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.056
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.34
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.39
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.52
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.1
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 3.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 22 6.1
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.4
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 8.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.5
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.018
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PPPPPP PP PPP P R P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXP 882
PP PP P PP PP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 818 PPXPXPPPXPPXPXXXXXPPXPXPXP 895
PP PPP PP P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
Frame = +3
Query: 834 PPPXPPXP--XXPXXPPPP 884
PPP PP P P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 809 PPXPPXPXPPPXPPXPXXXXXPPXPXP 889
PP P P PPP P PP P P
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +2
Query: 809 PPXPPXPXPPPXPPXP--XXXXXPPXPXPXPAL 901
PP P PPP PP P PP P P PA+
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PPP P PP PPP P P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 821 PXPXPPPXPPXPXXXXXPPXPXPXPAL 901
P P P P PP PP P P P +
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGV 770
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 796 LXXPPPPPPXPXXPPXXPPPXXXPXXPXP 882
L PPPPPP P P P P P P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVP-PPAP 756
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 809 PPXPPXPXPPPXPPXPXXXXXPPXPXP 889
P P P P P PP P PP P P
Sbjct: 742 PTPAPAPIPVP-PPAPIMGGPPPPPPP 767
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 812 PXPPXPXPPPXPPXPXXXXXPPXP 883
P PP P PP PP P P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 25.4 bits (53), Expect(2) = 0.34
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 808 PPPPPXPXXPP 840
PPPPP P PP
Sbjct: 238 PPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 805 PPPPPPXP 828
PPPPPP P
Sbjct: 189 PPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 0.34
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 805 PPPPPPXP 828
PPPPPP P
Sbjct: 190 PPPPPPPP 197
Score = 23.0 bits (47), Expect(2) = 1.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 808 PPPPPXPXXPPXXPP 852
P P P P PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 809 PPXPPXPXPPPXPPXPXXXXXPPXPXPXP 895
PP PP PPP P P PP P P
Sbjct: 1707 PPPPPMSVPPP-PSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPP-PXXXPXXPXP 882
PPPPP PP PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +1
Query: 805 PPPP---PPXPXXPPXXPPPXXXPXXPXPRPXA 894
PPPP PP P PP P P P P A
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
P PPPP P PPP P P P A P
Sbjct: 1705 PTPPPP----PMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 818 PPXPXPPPXPPXPXXXXXPPXP 883
PP P PP P P PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 818 PPXPXPPPXPPXPXXXXXPPXPXPXPA 898
PP P PP P PP P PA
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPA 1725
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 809 PPXPPX-PXPPPXPPXPXXXXXPPXPXPXPA 898
PP P P PP PP P P P P PA
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAP-PPPLPA 1737
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +2
Query: 809 PPXPPXPXPPPXP-PXPXXXXXPPXPXPXPA 898
PP P PPP P P PP P P+
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS 1729
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 805 PPPP--PPXPXXPPXXPPPXXXPXXPXP 882
PPPP PP P PP PP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPP-PPLPASSAP 1741
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 899 GXAXGRGXGXXGXXXG-GGXXGGXXGXGGGGGGXXKAK 789
G RG G G G GG G G GG GG AK
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 899 GXAXGRGX--GXXGXXXGGGXXGGXXGXGGGGG 807
G GRG G G GGG G G GG GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 899 GXAXGRGXGXXGXXXGGGXXGGXXGXGGGG 810
G GRG G GG GG G G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = -3
Query: 899 GXAXGRGXGXXGXXXGGGXXGGXXGXGGG--GGGXXKAKXYXG 777
G GRG G G GG G GG GGG A+ G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Frame = +1
Query: 808 PPPPPXPXXPPXXP---PPXXXPXXPXPRPXAXP 900
PP P P PP P PP P P P A P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXA 894
PP P P PP P P P P P A
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 809 PPXPPX-PXPPPXPPXPXXXXXPPXPXPXPA 898
PP P P PP PP PP P P PA
Sbjct: 457 PPLPAGMPAAPPLPPAAPAP--PPAPAPAPA 485
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 808 PPPPPXPXXPPXXPP-PXXXPXXPXPRPXAXP 900
P PP P P PP P P P P P A P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAP-PLPPAAP 474
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 793 ALXXPPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
+L PPPPP PP P P P + P
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PPPPPP PP P A P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP PPP P P P P
Sbjct: 1179 PPVPKPAAGVPPV-PPPSEAPPVPKPSVGVPP 1209
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 808 PPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP PP PP P P P P A P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP PPP P P P P
Sbjct: 1198 PPVPKPSVGVPPV-PPPSTAPPVPTPSAGLPP 1228
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 818 PPXPXPPPXPPXPXXXXXPPXP 883
PP P P PP P PP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVP 1053
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 818 PPXPXPPPXPPXPXXXXXPPXPXPXPA 898
P P P PP P PP P P A
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP P P P P P A P
Sbjct: 1102 PPVPKPSVAVPPV-PAPSGAPPVPKPSVAAPP 1132
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP P P P P P A P
Sbjct: 1140 PPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPP 1170
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 7/38 (18%)
Frame = +2
Query: 809 PPXPPXPXPPP-------XPPXPXXXXXPPXPXPXPAL 901
PP PP PP PP P PP P P L
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP P P P P P A P
Sbjct: 1121 PPVPKPSVAAPPV-PVPSGAPPVPKPSVAAPP 1151
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P PP P P P P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 818 PPXPXPPPXPPXP 856
PP P PPP PP P
Sbjct: 807 PPAPLPPPAPPLP 819
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 809 PPXPPXPXPPPXPPXPXXXXXPPXPXPXP 895
PP P P P P P PP P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPP 855
PPPPPP P P P
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PP P P P PPP P P P + P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQ-PAAPVKSPPSAP 188
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 87 VPLLLSGDLRDEDTLL*IHKKTDHHSHCSINY 182
+P S L D+D+L + K H+HC N+
Sbjct: 1575 LPFSTSSTLADKDSLSAVKKLALDHAHCDYNF 1606
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 805 PPPPPPXP 828
PPPPPP P
Sbjct: 307 PPPPPPPP 314
Score = 21.8 bits (44), Expect(2) = 3.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 796 LXXPPPPPP 822
L PPPPPP
Sbjct: 305 LPPPPPPPP 313
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 805 PPPPPPXPXXPPXXPPPXXXPXXP 876
PPPPPP P P P P
Sbjct: 240 PPPPPPRPSQPTSGESQNTNPRFP 263
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 899 GXAXGRGXGXXGXXXGGGXXGGXXGXGGGGGG 804
G G G G G GGG G G GG GGG
Sbjct: 235 GGPGGFGGGPGGF--GGGLGGFGGGPGGFGGG 264
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 901 EGXPXXGGGGXXG-XXGXGGXGGG 833
EG P GGG G G GG GGG
Sbjct: 234 EGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 881 GXGXXGXXXG-GGXXGGXXGXGGGGGGXXKAKXYXGH 774
G G G G GG G G GG GG + + GH
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGH 223
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 22.2 bits (45), Expect(2) = 6.1
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = +2
Query: 773 HDXXNXXLWXXXPPXPPXPXPPP 841
+D + W PP P PPP
Sbjct: 355 NDESSRSRWSNISYSPPPPPPPP 377
Score = 22.2 bits (45), Expect(2) = 6.1
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2
Query: 833 PPPXPPXPXXXXXPPXPXP 889
PPP PP P P P
Sbjct: 370 PPPPPPPPELLNHSPKSRP 388
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 796 LXXPPPPPPXPXXPPXXPPP 855
L PPPP PP PPP
Sbjct: 45 LTIPPPPSVDHSAPPSGPPP 64
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 505 HFKPLQQHLSFASGIMTNFCCIC 573
+F PL +HL+FAS +++F C
Sbjct: 592 YFYPLLEHLAFASPYVSSFAEAC 614
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 811 PPPPXPXXPPXXPPPXXXPXXPXPRPXAXP 900
PPPP P P PP P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALP-PAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,998,830
Number of Sequences: 5004
Number of extensions: 55896
Number of successful extensions: 515
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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