Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O11
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z83232-3|CAE46672.1|  381|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z83232-2|CAB05754.2|  420|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AF047658-5|AAC04416.3|  434|Caenorhabditis elegans Hypothetical ...    29   6.2  

>Z70212-9|CAA94168.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 83  MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 172
           M   ++L F VA VGY+   +   RK PKG
Sbjct: 1   MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30


>Z50742-6|CAA90619.1|  491|Caenorhabditis elegans Hypothetical
           protein R04D3.1 protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 83  MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 172
           M   ++L F VA VGY+   +   RK PKG
Sbjct: 1   MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30


>Z83232-3|CAE46672.1|  381|Caenorhabditis elegans Hypothetical
           protein K04B12.2b protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 70  ENVSNEKFYCIVVCCGSCRLRHRATFS 150
           +N+ +E+F+C+  CC   RL    T++
Sbjct: 196 KNLLDEEFFCLAPCCSGMRLFQAETYT 222


>Z83232-2|CAB05754.2|  420|Caenorhabditis elegans Hypothetical
           protein K04B12.2a protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 70  ENVSNEKFYCIVVCCGSCRLRHRATFS 150
           +N+ +E+F+C+  CC   RL    T++
Sbjct: 235 KNLLDEEFFCLAPCCSGMRLFQAETYT 261


>AF047658-5|AAC04416.3|  434|Caenorhabditis elegans Hypothetical
           protein K03H6.5 protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 213 TVRIPKSTISLTTWAHATYHSASATGLMSGTRKLGKCVPESE 338
           +V I  ST+ LT++ H + H+        GT+ LGKC P +E
Sbjct: 162 SVGIMVSTLFLTSYHHFS-HTCITYIACHGTQILGKCYPNTE 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,672,541
Number of Sequences: 27780
Number of extensions: 256571
Number of successful extensions: 484
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)