Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O08
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p pro...    60   4e-09
AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA...    60   4e-09
BT003763-1|AAO41442.1|  652|Drosophila melanogaster RE39251p pro...    30   5.0  
AY069625-1|AAL39770.1|  268|Drosophila melanogaster LD39545p pro...    30   5.0  
AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC...    30   5.0  
AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB...    30   5.0  
AE014296-962|AAN12097.1|  268|Drosophila melanogaster CG10625-PD...    30   5.0  
AE014296-961|AAN12096.1|  268|Drosophila melanogaster CG10625-PA...    30   5.0  
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    29   8.7  
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...    29   8.7  
AE014298-2546|AAF48714.1|  250|Drosophila melanogaster CG10597-P...    29   8.7  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    29   8.7  

>AY071733-1|AAL49355.1|   77|Drosophila melanogaster RH45008p
           protein.
          Length = 77

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = +2

Query: 89  MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 268
           M+A++ +    L+++ WNEIP+I   +               NY   DGDNRRYK  YVV
Sbjct: 1   MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60

Query: 269 MRPDDPRVKLIRKE 310
            R DDPR   +R +
Sbjct: 61  YRHDDPRALKVRND 74


>AE014298-1291|AAF46455.1|   77|Drosophila melanogaster CG9034-PA
           protein.
          Length = 77

 Score = 60.1 bits (139), Expect = 4e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = +2

Query: 89  MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 268
           M+A++ +    L+++ WNEIP+I   +               NY   DGDNRRYK  YVV
Sbjct: 1   MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60

Query: 269 MRPDDPRVKLIRKE 310
            R DDPR   +R +
Sbjct: 61  YRHDDPRALKVRND 74


>BT003763-1|AAO41442.1|  652|Drosophila melanogaster RE39251p
           protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 500 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 557

Query: 821 P 823
           P
Sbjct: 558 P 558


>AY069625-1|AAL39770.1|  268|Drosophila melanogaster LD39545p
           protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 116 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 173

Query: 821 P 823
           P
Sbjct: 174 P 174


>AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC,
           isoform C protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 530 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 587

Query: 821 P 823
           P
Sbjct: 588 P 588


>AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB,
           isoform B protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 530 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 587

Query: 821 P 823
           P
Sbjct: 588 P 588


>AE014296-962|AAN12097.1|  268|Drosophila melanogaster CG10625-PD,
           isoform D protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 116 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 173

Query: 821 P 823
           P
Sbjct: 174 P 174


>AE014296-961|AAN12096.1|  268|Drosophila melanogaster CG10625-PA,
           isoform A protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 641 GXGGXXXRLXPXLXEXAHPPXGKXXXXLXGXPXPXSPAXPXXPSAPXSFPAAXXPGXXRP 820
           G GG      P   +  + P G       G P P  P  P  P+ P  F     PG   P
Sbjct: 116 GPGGPGGPKGPGGPKGPNGPNGPPGPP--GPPGPPGPPGPKGPTKPGPFGPPGPPGPPGP 173

Query: 821 P 823
           P
Sbjct: 174 P 174


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 757 GGGGXGXGXPXKGXAXFSXGGVGGFXKARXK 665
           GGGG G G   +G      GG GGF   R +
Sbjct: 19  GGGGGGGGGGFRGRGGGGGGGGGGFGGGRGR 49


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 757 GGGGXGXGXPXKGXAXFSXGGVGGFXKARXK 665
           GGGG G G   +G      GG GGF   R +
Sbjct: 12  GGGGGGGGGGFRGRGGGGGGGGGGFGGGRGR 42


>AE014298-2546|AAF48714.1|  250|Drosophila melanogaster CG10597-PA
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -2

Query: 828 FXGGRXXPGWXAAGXEXGAEGXXGXAGEXGXG 733
           + GGR   GW  AG   G  G  G  G  G G
Sbjct: 156 YGGGRGSGGWQGAGAGAGRGGAGGAGGWQGAG 187


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 757 GGGGXGXGXPXKGXAXFSXGGVGGFXKARXK 665
           GGGG G G   +G      GG GGF   R +
Sbjct: 12  GGGGGGGGGGFRGRGGGGGGGGGGFGGGRGR 42


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,572,671
Number of Sequences: 53049
Number of extensions: 587092
Number of successful extensions: 3480
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)