Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_O07
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 284 5e-77
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 284 5e-77
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 284 5e-77
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 245 4e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 77 1e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 77 1e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 77 1e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 74 1e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 74 1e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 55 8e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 8e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 4e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.013
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 35 0.088
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 35 0.088
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.47
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.5
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 7.7
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 7.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 284 bits (697), Expect = 5e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 466
DKLKA+RERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 467 GEFEAGISXNGQTREHAL 520
GEFEAGIS NGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 284 bits (697), Expect = 5e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 466
DKLKA+RERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 467 GEFEAGISXNGQTREHAL 520
GEFEAGIS NGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
Score = 69.3 bits (162), Expect = 3e-12
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = +3
Query: 522 LAFTLGVKQLIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXKIGXXPPXLSPFRAPFSWD 701
LA TLGVKQLIV NKMDSTEPP+SE F EI EVS +I KIG P + PF P S
Sbjct: 139 LAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV-PF-VPIS-G 195
Query: 702 XHGRPHVGXPXTXNGPWVPTGWXVD 776
+G + + N PW GW V+
Sbjct: 196 FNGDNML--EVSSNMPWF-KGWAVE 217
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 284 bits (697), Expect = 5e-77
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 466
DKLKA+RERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 467 GEFEAGISXNGQTREHAL 520
GEFEAGIS NGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
Score = 69.3 bits (162), Expect = 3e-12
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = +3
Query: 522 LAFTLGVKQLIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXKIGXXPPXLSPFRAPFSWD 701
LA TLGVKQLIV NKMDSTEPP+SE F EI EVS +I KIG P + PF P S
Sbjct: 139 LAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV-PF-VPIS-G 195
Query: 702 XHGRPHVGXPXTXNGPWVPTGWXVD 776
+G + + N PW GW V+
Sbjct: 196 FNGDNML--EVSSNMPWF-KGWAVE 217
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 245 bits (599), Expect = 4e-65
Identities = 112/117 (95%), Positives = 116/117 (99%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 457
DKLKA+RERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/76 (46%), Positives = 43/76 (56%)
Frame = +3
Query: 549 LIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXKIGXXPPXLSPFRAPFSWDXHGRPHVGX 728
L+V NKMDSTEPP+SE F EI EVS +I KIG P + PF P S +G +
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV-PF-VPIS-GFNGDNML-- 168
Query: 729 PXTXNGPWVPTGWXVD 776
+ N PW GW V+
Sbjct: 169 EVSSNMPWF-KGWAVE 183
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 176 bits (429), Expect = 1e-44
Identities = 79/135 (58%), Positives = 101/135 (74%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 295
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 296 KADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 475
+ +RERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 476 EAGISXNGQTREHAL 520
E G GQT+EHAL
Sbjct: 287 ETGFENGGQTKEHAL 301
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 531 TLGVKQLIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXK-IGXXPPXLSP 677
+LGV QLIV VNK+D+ + +S+ F EIK +S ++ + G P P
Sbjct: 305 SLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPKFVP 352
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 176 bits (429), Expect = 1e-44
Identities = 79/135 (58%), Positives = 101/135 (74%)
Frame = +2
Query: 116 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 295
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 296 KADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 475
+ +RERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 476 EAGISXNGQTREHAL 520
E G GQT+EHAL
Sbjct: 305 ETGFENGGQTKEHAL 319
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 531 TLGVKQLIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXK-IGXXPPXLSP 677
+LGV QLIV VNK+D+ + +S+ F EIK +S ++ + G P P
Sbjct: 323 SLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPKFVP 370
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 159 bits (386), Expect = 2e-39
Identities = 69/137 (50%), Positives = 98/137 (71%)
Frame = +2
Query: 110 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 289
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 290 KLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
+RE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 470 EFEAGISXNGQTREHAL 520
EFE G GQTREH++
Sbjct: 224 EFETGFDRGGQTREHSM 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 522 LAFTLGVKQLIVGVNKMDSTEPPYSEPXFXEIKKEVSSYIXKIGXXP 662
L T GVK L++ VNKMD + E F EI+ +++ ++ K+G P
Sbjct: 241 LVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKADR 307
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/136 (36%), Positives = 69/136 (50%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 293 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
++ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 473 FEAGISXNGQTREHAL 520
QTREH L
Sbjct: 150 MP-------QTREHLL 158
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/136 (36%), Positives = 69/136 (50%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 293 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
++ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 473 FEAGISXNGQTREHAL 520
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 77.4 bits (182), Expect = 1e-14
Identities = 49/136 (36%), Positives = 69/136 (50%)
Frame = +2
Query: 113 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 293 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
++ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 473 FEAGISXNGQTREHAL 520
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 74.1 bits (174), Expect = 1e-13
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 293 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
K +++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 473 FEAGISXNGQTREHAL 520
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 74.1 bits (174), Expect = 1e-13
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 293 LKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
K +++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 473 FEAGISXNGQTREHAL 520
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 55.2 bits (127), Expect = 6e-08
Identities = 36/113 (31%), Positives = 52/113 (46%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
N ++ HVD GKST L+ CG + +K+ +LDKL+ +RE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.8 bits (126), Expect = 8e-08
Identities = 42/134 (31%), Positives = 61/134 (45%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
NI + H+DSGK+T T ++Y G ID E+ +G +D + +R+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 490
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 491 XNGQTREHALARFH 532
T LAR++
Sbjct: 151 SQTFTVNRQLARYN 164
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.8 bits (126), Expect = 8e-08
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
NI VI HVD+GK+T T L+Y G I A + KG+ V D L +RE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 259
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 260 GSFKYAWVLDKLKADRERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 427
+ + L+K + +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 428 QADCAVLIVAAGTG 469
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 259
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 260 GSFKYAWVLDKLKADRERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 427
+ + L+K + +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 428 QADCAVLIVAAGTG 469
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.7 bits (86), Expect(2) = 4e-04
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 254 GKGSFKYAWVLDKLKADRERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 430
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 431 ADCAVLIVAAGTG 469
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 4e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 134 IVVIGHVDSGKST 172
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.013
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 113 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 289
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 290 KLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
+ ++ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.013
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 113 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 289
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 290 KLKADRERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
+ ++ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.088
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.7 bits (76), Expect = 0.088
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.47
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADR 307
+N+ ++GHVDSGK+T T + E+G S A D
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTT-TDG 53
Query: 308 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 484
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 485 ISXNGQTREHAL 520
I QT EH L
Sbjct: 109 IQP--QTAEHLL 118
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 362 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 457
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 371 IIDAPGHRDFIKNMITGTSQADCAVLIV 454
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.5 bits (63), Expect = 3.3
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 301
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 302 DRERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 463
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAAD 285
Query: 464 TG 469
G
Sbjct: 286 RG 287
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADR 307
+N+ ++GHVDSGK+T T + E+G S A D
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHA-TSTTTDG 53
Query: 308 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 451
R T+D+ + S + +ID PGH I+ ++ ++ D A++I
Sbjct: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVI 102
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
+KR ++ EKE + F Y LDK+K +R+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKADRE 310
+KR ++ EKE + F Y LDK+K +R+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,410,798
Number of Sequences: 27780
Number of extensions: 357955
Number of successful extensions: 889
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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