Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O06
         (1359 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0059 - 394001-394708                                             33   0.39 
02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.6  
03_01_0515 - 3864796-3865425                                           31   2.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       30   4.9  

>08_01_0059 - 394001-394708
          Length = 235

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
 Frame = +2

Query: 356 PXXXXGPPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXG--RXSXXPPP 529
           P     PP   PP P+   R  P  +       P   P  PPP    P         PPP
Sbjct: 14  PATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSPPP 73

Query: 530 XXXXFSLFPSXG 565
                 +F S G
Sbjct: 74  HIVIIVVFVSFG 85


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = +2

Query: 374 PPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXGRXSXXPPP 529
           PP   PP P       P  +       P   P  PPP    P G+    PPP
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP--PPPGGKKGGPPPP 380



 Score = 29.5 bits (63), Expect = 6.4
 Identities = 15/52 (28%), Positives = 15/52 (28%)
 Frame = +2

Query: 374 PPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXGRXSXXPPP 529
           PP   PP PA      P          P   P  PPP    P       P P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 17/58 (29%), Positives = 17/58 (29%)
 Frame = +2

Query: 356 PXXXXGPPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXGRXSXXPPP 529
           P    GP    PP P       P          P   P  PPP    P    S  PPP
Sbjct: 62  PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 7/66 (10%)
 Frame = -1

Query: 549 REXLXXXGGGXXXXRPXGXXXXG-------GGXXGXXXGXXXXXXXEXXGXXRXPXAGAG 391
           R  L   GGG    RP G    G       GG  G   G          G  R P  G G
Sbjct: 145 RRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGG 204

Query: 390 GXXXGG 373
           G   GG
Sbjct: 205 GGGLGG 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.145    0.507 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,639,869
Number of Sequences: 37544
Number of extensions: 317174
Number of successful extensions: 2687
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2397
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4283391936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)