Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O06
         (1359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.         32   5.5  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   26   7.5  
U10063-1|AAA57161.1|  423|Homo sapiens POU domain factor protein.      31   9.7  
L20433-1|AAA65605.1|  420|Homo sapiens octamer binding transcrip...    31   9.7  

>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
          Length = 1248

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 18/62 (29%), Positives = 18/62 (29%)
 Frame = +2

Query: 344 PXXXPXXXXGPPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXGRXSXXP 523
           P   P     PP   PP P       P          P   P  PPP    P G     P
Sbjct: 564 PPSVPSRAPVPPA--PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGTAISPP 621

Query: 524 PP 529
           PP
Sbjct: 622 PP 623


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 25.8 bits (54), Expect(2) = 7.5
 Identities = 16/61 (26%), Positives = 16/61 (26%)
 Frame = +2

Query: 344 PXXXPXXXXGPPXXXPPAPAXGXRXXPXXSXXXXXXXPXXXPXXPPPXXXXPXGRXSXXP 523
           P   P      P   PP P       P          P   P  PPP       R S  P
Sbjct: 77  PQGPPPQGGNQPQGPPPPPGKPQGPPPQGDNKSQGPPPPGKPQGPPP-QGGSKSRSSRSP 135

Query: 524 P 526
           P
Sbjct: 136 P 136



 Score = 24.2 bits (50), Expect(2) = 7.5
 Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
 Frame = +2

Query: 119 PXAPXXRPXAPGPXAXXXAXPP--GGXXPRGXXGPGXXXG 232
           P     +P  P P       PP  GG  P+G   PG   G
Sbjct: 19  PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 58


>U10063-1|AAA57161.1|  423|Homo sapiens POU domain factor protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 1020 PXGGGVXGGXXRXGGGGPXXGXG 952
            P GGG  GG    GGGGP  G G
Sbjct: 150  PGGGGGPGGGGGPGGGGPGGGGG 172


>L20433-1|AAA65605.1|  420|Homo sapiens octamer binding transcription
            factor 1 protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 1020 PXGGGVXGGXXRXGGGGPXXGXG 952
            P GGG  GG    GGGGP  G G
Sbjct: 147  PGGGGGPGGGGGPGGGGPGGGGG 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.145    0.507 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,941,454
Number of Sequences: 237096
Number of extensions: 1454638
Number of successful extensions: 8242
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7513
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19676479106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)