Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O02
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ...    34   0.11 
Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...    30   2.3  
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
           protein Y66H1B.3 protein.
          Length = 1084

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
 Frame = +2

Query: 368 NGKIYEGAGWNHIGAHTLHYNNISIGIGFI------GDFREKLPTQQALQAVQDFLACGV 529
           N K+  G  W  I    LHY   SI +G+I      GD +E+ P Q+ L  +++ L  G+
Sbjct: 116 NKKLILGLVWTLI----LHY---SISMGWIQEKREDGDNKEETPKQKLLNWIRNRLP-GM 167

Query: 530 ENNLLTEDYHV-VGHQQLINTLSPGAVLQSEIESWPHWLDN 649
             +  T D++  V    L+N+++PGA     +E W +W  N
Sbjct: 168 PISNFTSDWNDGVALGALVNSMAPGA-----LEDWENWSPN 203


>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 40  DFDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 138
           D  LH D S+   KDVG  V   +G +  +R+P
Sbjct: 318 DIALHKDGSRYWIKDVGPAVESYIGFIENYRDP 350


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 40  DFDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 138
           D  LH D S+   KDVG  V   +G +  +R+P
Sbjct: 280 DIALHKDGSRYWIKDVGPAVESYIGFIENYRDP 312


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 40  DFDLHSDKSKTGCKDVGCTVSIIVGVLGEFRNP 138
           D  LH D S+   KDVG  V   +G +  +R+P
Sbjct: 318 DIALHKDGSRYWIKDVGPAVESYIGFIENYRDP 350


>Z81500-6|CAB04099.1|  221|Caenorhabditis elegans Hypothetical
           protein F11D11.8 protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
 Frame = +2

Query: 257 NDCFTDEECLLS-VNSLRQHHMR-------LAGFKDLGYSFVAGGNGKIYE----GAGWN 400
           ++CF D ECLL+  NS   H+          A +KD+ YS V   +G IY      AGW+
Sbjct: 48  DECFEDSECLLAFFNSACFHYYTELPDATCPASYKDIKYS-VTSDSGDIYSWKKTDAGWS 106

Query: 401 H 403
           +
Sbjct: 107 Y 107


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 201 RRDSVPLHSVMGISPHSDAAFRVPKLTKNTNNNRDGATN 85
           R DS+P+  V+GISP   A F       N  ++ D + N
Sbjct: 244 RNDSIPIEPVVGISPVLVANFNRTSPDSNNTHHHDESRN 282


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 666  PSTFRALSSQWGQLSISDCSTAPGLSVFINC 574
            P  F+ +S Q   + ISDCST   L+ FI C
Sbjct: 1489 PYPFKEMSQQ---IDISDCSTHYSLTTFITC 1516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,920,174
Number of Sequences: 27780
Number of extensions: 404527
Number of successful extensions: 920
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)