Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_O01
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0812 + 23383704-23384143,23384902-23385247                      265   3e-71
06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788,611...    30   2.1  

>12_02_0812 + 23383704-23384143,23384902-23385247
          Length = 261

 Score =  265 bits (650), Expect = 3e-71
 Identities = 119/189 (62%), Positives = 148/189 (78%)
 Frame = +2

Query: 83  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 262
           MGRVIRAQRKGAGSVF SHT  RKG  + RSLD+ ER+GY+KGVV DIIHDPGRGAPLA 
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 263 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 442
           V FR P+++K +KELF+A EG+YTGQFVYCG++ATL +GNV+P+ ++PEG +VCN+E  +
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHV 120

Query: 443 GDRGRLARASGNFXTVIGHNPDAXRTRVKLPSGAKKVLPSSNXXXXXXXXXXXXXDQPIL 622
           GDRG  ARASG++  VI HNPD   +R+KLPSGAKK++PSS              ++P+L
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPML 180

Query: 623 KAGRAYHKY 649
           KAG AYHKY
Sbjct: 181 KAGNAYHKY 189



 Score = 33.5 bits (73), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +3

Query: 654 VKRNCWPYVRGVAM 695
           VKRNCWP VRGVAM
Sbjct: 191 VKRNCWPKVRGVAM 204


>06_01_0811 -
           6113491-6113925,6114079-6114185,6114569-6114788,
           6115112-6115199,6115301-6115431,6115924-6116099,
           6116465-6116529,6117014-6117094,6117219-6117358,
           6117446-6117532,6117614-6117827,6118102-6118260,
           6118860-6118936,6119629-6119796
          Length = 715

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 592 WRWTY*PTYFESWKGIPQVQ 651
           W WTY  T+F SW  +P +Q
Sbjct: 70  WSWTYWSTFFLSWSIVPTLQ 89


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,992,130
Number of Sequences: 37544
Number of extensions: 418447
Number of successful extensions: 916
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)