Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_N23
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 213 1e-55
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 212 2e-55
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 95 6e-20
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 66 3e-11
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 31 1.1
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 31 1.1
U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 29 4.4
U41030-1|AAA82362.2| 371|Caenorhabditis elegans Hypothetical pr... 29 5.8
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 213 bits (520), Expect = 1e-55
Identities = 99/188 (52%), Positives = 131/188 (69%), Gaps = 2/188 (1%)
Frame = +2
Query: 107 IMSLVAQAFEASKIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAE 283
+ ++ A+AF +++PDV+ P+K + +K+ SG A+ GN LTPTQVKD P V ++AE
Sbjct: 34 LATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAE 93
Query: 284 ADAFYTLVFTDPDNYDGPELVYREWHHWLVGNIPGGDVSAGETLSGYIGSGPPQGTGIHR 463
A YTL+ TDPD E YREWHHWLV NIPG D++ G+TLS YIG+GPP TG+HR
Sbjct: 94 PGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHR 153
Query: 464 YVYILYKQPGKL-DFDEKRLTNTSIDGRASFSTKKFAEKYNLGAPVAGNFYRAQFDDYVP 640
YVY++YKQ G++ D + RLTNTS D R + F K+ LGAPV GN ++A++DDYVP
Sbjct: 154 YVYLIYKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQAEYDDYVP 213
Query: 641 QLYKSLGA 664
L K LGA
Sbjct: 214 ILNKQLGA 221
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 212 bits (518), Expect = 2e-55
Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Frame = +2
Query: 116 LVAQAFEASKIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADA 292
+ A+AF +++PDV+ P+K + +K+ SG A+ GN LTPTQVKD P V ++AE A
Sbjct: 1 MAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEPGA 60
Query: 293 FYTLVFTDPDNYDGPELVYREWHHWLVGNIPGGDVSAGETLSGYIGSGPPQGTGIHRYVY 472
YTL+ TDPD E YREWHHWLV NIPG D++ G+TLS YIG+GPP TG+HRYVY
Sbjct: 61 LYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVY 120
Query: 473 ILYKQPGKL-DFDEKRLTNTSIDGRASFSTKKFAEKYNLGAPVAGNFYRAQFDDYVPQLY 649
++YKQ G++ D + RLTNTS D R + F K+ LGAPV GN ++A++DDYVP L
Sbjct: 121 LIYKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQAEYDDYVPILN 180
Query: 650 KSLGA 664
K LGA
Sbjct: 181 KQLGA 185
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 95.1 bits (226), Expect = 6e-20
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Frame = +2
Query: 110 MSLVAQAFEASKIVPDVIPVAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFE-AEA 286
MS ++ AF +I P +I AP + + L + G G + +K+ P A+
Sbjct: 1 MSDISAAFAQHEITPKIIENAPKQKLHLCW-DGIQVEPGMTMQVRNLKNAPRWALPGADP 59
Query: 287 DAFYTLVFTDPDNYDGPELVYREWHHWLVGNIPGGD----VSAGETLSGYIGSGPPQGTG 454
++ YT++ DPDN EW HWLV NIP + ++ G+ Y P T
Sbjct: 60 ESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNIPASNIIDGINGGQHQMAYGSPAPGPRTD 119
Query: 455 IHRYVYILYKQPGKLDFDEKRLTNTSIDGRASFSTKKFAEKYNLGAPVAGNFYRAQFD 628
+HRYV ++++ G +R++ RA F+ K+F EK LG P+AGNF+ AQ +
Sbjct: 120 LHRYVILMWEHAG------RRISVPKPSSRAKFNVKQFIEKNKLGDPIAGNFFLAQHE 171
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = +2
Query: 179 KNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADA--FYTLVFTDPDNYDGPELVYR 352
+N+++ + + + GN +T +P +T E+ + F TL+ + D
Sbjct: 155 QNLQVNFENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNG 214
Query: 353 EWHHWLVGNIPGGD-VSAGETLSGYIGSGPPQGTGIHRYVYILYKQPGKLDFDEKRLTNT 529
E W++ NIP G+ +SAG + Y+ P GTG HR ++L++ +DF ++
Sbjct: 215 EIVQWMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVLFRHEKPVDF---QIQGN 271
Query: 530 SIDGRASFSTKKFAEKYNLGAPVAGNFYRAQFDDYVPQLYKSLG 661
S+D R +K + + P A F++ +D+ V LG
Sbjct: 272 SLDTRIHEISKFYKKHEATITPSAIRFFQTSYDNSVKMALHGLG 315
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 362 HWLVGNIPGGDVSA----GETLSGYIGSGPPQGTGIHRYVYILYKQPGKLDFDEKRLTNT 529
HWL +IP +++A G T + Y+ P + + H Y+++L QP + E
Sbjct: 375 HWLEVDIPAANLNAANGNGLTKADYVPLIPKKPSTCHSYLFVLLAQPASMQTLES-YCEG 433
Query: 530 SIDGRASFSTKKFAEKYNL 586
+ R F + F +++ L
Sbjct: 434 MCETRKKFRLELFKQQHGL 452
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 453 PVPWGGPEPMYPDRVSPAETSP----PGMFPTSQ 364
P+P+G P+PM+ + P +P PG FP+ Q
Sbjct: 430 PMPYGQPQPMFQPQYQPTFAAPYPTFPGAFPSYQ 463
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 453 PVPWGGPEPMYPDRVSPAETSP----PGMFPTSQ 364
P+P+G P+PM+ + P +P PG FP+ Q
Sbjct: 814 PMPYGQPQPMFQPQYQPTFAAPYPTFPGAFPSYQ 847
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 453 PVPWGGPEPMYPDRVSPAETSP----PGMFPTSQ 364
P+P+G P+PM+ + P +P PG FP+ Q
Sbjct: 793 PMPYGQPQPMFQPQYQPTFAAPYPTFPGAFPSYQ 826
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -2
Query: 453 PVPWGGPEPMYPDRVSPAETSP----PGMFPTSQ 364
P+P+G P+PM+ + P +P PG FP+ Q
Sbjct: 793 PMPYGQPQPMFQPQYQPTFAAPYPTFPGAFPSYQ 826
>U41559-1|AAC24260.1| 373|Caenorhabditis elegans Hypothetical
protein C26B2.8 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.4
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 14/175 (8%)
Frame = +2
Query: 131 FEASKIVPDVIPVAPTKNIELKYPSGAIASQGNELTP---TQVKDQP--SVTFEAEADAF 295
F ++IVP ++PVAP + + I S G ++ D P S E + +
Sbjct: 202 FRENRIVPRLLPVAPAYELIATFSDEQI-SMGQLFDADILDKLADPPVMSAGVELQDEKL 260
Query: 296 YTLVFTDPDNYDGPELVYREWHHWLVGNIPG--GDVSAGETLSGYIGSGPPQGT----GI 457
YT++ D + + WLV NI G + + PP T G+
Sbjct: 261 YTIILADATS---------KAVTWLVANIAAFDGQLEIHRRTKSAVSYQPPDSTDRPVGM 311
Query: 458 HRYVYILYKQPGKLDFDEKRLTNTSIDGRASFSTKKFAEKYNLGAP---VAGNFY 613
H + LY+Q + +K L ++D F+ ++ E+Y P +A FY
Sbjct: 312 HTMILALYEQND--TWTQKDLARIAMD---DFNFTEWLEEYAHVLPAQALAATFY 361
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 635 HSRRTALCRSCRRQAPPGCTFQRTSSWRTRRDHQ*TCSL 519
+ R +C C P C Q +W T +D+ CSL
Sbjct: 17 YEHRVNVCEFCLVDNHPNCVVQSYLTWLTDQDYDPNCSL 55
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 155 DVIPVAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAE--ADAFYTLVFTDPDNY 328
DV P PT N+ P ++ Q +E +P SV E E A + TLVFT+
Sbjct: 433 DVSP--PTSNVTQDSPK-EMSYQHSEPSPALPSPDASVPSEHERFARSPPTLVFTEQSTE 489
Query: 329 DGPELVYREWHH 364
D PE HH
Sbjct: 490 DAPESPNEVVHH 501
>U41030-1|AAA82362.2| 371|Caenorhabditis elegans Hypothetical
protein C44C1.2 protein.
Length = 371
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 353 EWHHWLVGNIPGGDVS-AGETLSGY-IGSGPPQGTGIHRYVYILYKQPGKLDFDEKRL 520
+W + + GG + AG GY G + RY+ +L + KL+FDEK +
Sbjct: 264 DWFESCIFYLGGGHKTLAGLNFYGYEFSKGNVEAITADRYLTLLKSEKSKLEFDEKSM 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,894,001
Number of Sequences: 27780
Number of extensions: 356646
Number of successful extensions: 1119
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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