Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_N22
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 47 2e-05
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 47 2e-05
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 41 0.001
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 41 0.001
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 35 0.072
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 35 0.072
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 35 0.072
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 35 0.072
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 35 0.072
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 35 0.072
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 35 0.096
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 35 0.096
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 4.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.3
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 6.3
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 187 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 366
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 367 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIIN 531
+ D T + N+++V+ Y + + T L+++ ++++FS + AA +N
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMN 126
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 47.2 bits (107), Expect = 2e-05
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 187 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQ 366
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 367 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIIN 531
+ D T + N+++V+ Y + + T L+++ ++++FS + AA +N
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMN 126
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = +1
Query: 214 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 393
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 394 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRLGGRTDSRTH 564
+ V ANK+Y+ + + F TA + ++ +++ + P +I + + T+ +
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPAAVQEINSFVNTATNGKIK 140
Query: 565 KDSCQPKTK 591
+ Q K
Sbjct: 141 NIATQDSIK 149
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = +1
Query: 214 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAEFDPKF 393
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 394 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAADIINRLGGRTDSRTH 564
+ V ANK+Y+ + + F TA + ++ +++ + P +I + + T+ +
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPAAVQEINSFVNTATNGKIK 140
Query: 565 KDSCQPKTK 591
+ Q K
Sbjct: 141 NIATQDSIK 149
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 35.1 bits (77), Expect = 0.072
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +1
Query: 232 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYAEFDPKFLTVA 405
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 406 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADIIN 531
N ++ +K+ ++ L+ + +++F + A+ IN
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAIN 130
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.096
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +1
Query: 178 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE--STHTY 351
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 352 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADII 528
+ + VAN I+ + + + + L+ + +NF + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 529 N 531
N
Sbjct: 139 N 139
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 34.7 bits (76), Expect = 0.096
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +1
Query: 178 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE--STHTY 351
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 352 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSAPKNAADII 528
+ + VAN I+ + + + + L+ + +NF + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 529 N 531
N
Sbjct: 139 N 139
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.13
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +1
Query: 208 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIR-EILGGGEAQESTHTYGLLNQRYAEFD 384
A D + ASP S S + ++K ++ + +A+ES + L++ ++ +
Sbjct: 60 ARDSSAPASPSAASPAGSRSPSPSPVKTKSKVMIDSDEDSDAEESANKRALIDSDASDAE 119
Query: 385 PKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKNAADIINRLGGRTDSRTH 564
K V SD + T NLF + D+ + PK D+ + GR D
Sbjct: 120 GKKRRVMLDSDDSDHEGTSKKEPTTKNLFGDDSDDDDEDRPKKTNDLDEFVEGR-DEEES 178
Query: 565 KDSCQPKTKIDPXHGPVAMF*XHFSF 642
+++ +P D GPV HF +
Sbjct: 179 QETSKPAYDSDDDDGPVDRHGRHFEW 204
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 780 PGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXPXXTXG 932
PG P G P P G+ P P P P PP P G
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 780 PGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXPXXTXG 932
PG P G P P G+ P P P P PP P G
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 780 PGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXPXXTXG 932
PG P G P P G+ P P P P PP P G
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 464 ICSEAKWTTLTSALRRMPLISSTVWADEQTPGHIKTPVSRRQKLT 598
IC T+ + R L +S+VW TP + T SR + LT
Sbjct: 203 ICEGPAQTSTAPSTRSSKLPTSSVWKATTTPSDLPTKPSRTRSLT 247
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
Frame = +2
Query: 371 TQNST-RNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWTTLTSALRRMPLISSTVWADE 547
TQ+ T NS SP K PT PT+ P + + ++ T++ AL P ++
Sbjct: 309 TQSVTPSNSTPSPAKPATPTKTPTPTKKPVENNETLSQVKTVSKALSHSPKSPKKNSQEK 368
Query: 548 QTPGHIKTPVSRRQKLTPXTGPLPCFNXIFPSQGAPGHVPXXTPSETEEKDXPRPXXKPX 727
P K P K T T P P P +P+ T +P P
Sbjct: 369 SAPPSPKLP----PKTTAPT-PTKDGGNHSPKTTNKALEPPPSPNRTHSPSAYQPAMSPK 423
Query: 728 PPRK 739
P K
Sbjct: 424 PTGK 427
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 581 RRQKLTPXTGPLPCFNXIFPSQGAPGHVPXXTPSETEEKDXPRPXXKPXPPR-KPAXWGL 757
R ++ P GP P N P G P P + ++ P P +P PP+ +P +
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPP------PPCQQYQQPQPPPCQRPQPPQPQPQPYPQ 137
Query: 758 LTXXCF-XPRKTE 793
T C PR E
Sbjct: 138 RTGGCLPSPRGYE 150
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 581 RRQKLTPXTGPLPCFNXIFPSQGAPGHVPXXTPSETEEKDXPRPXXKPXPPR-KPAXWGL 757
R ++ P GP P N P G P P + ++ P P +P PP+ +P +
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPP------PPCQQYQQPQPPPCQRPQPPQPQPQPYPQ 137
Query: 758 LTXXCF-XPRKTE 793
T C PR E
Sbjct: 138 RTGGCLPSPRGYE 150
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 581 RRQKLTPXTGPLPCFNXIFPSQGAPGHVPXXTPSETEEKDXPRPXXKPXPPR-KPAXWGL 757
R ++ P GP P N P G P P + ++ P P +P PP+ +P +
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPP------PPCQQYQQPQPPPCQRPQPPQPQPQPYPQ 137
Query: 758 LTXXCF-XPRKTE 793
T C PR E
Sbjct: 138 RTGGCLPSPRGYE 150
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 777 TPGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXP 917
TPG+P GAP K P +P PA P P P P
Sbjct: 117 TPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKP 163
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 641 SQGAPGHVPXXTPSETEEKDXPRPXXKPXPPRKP 742
S+ + VP PS E K P+P KP P P
Sbjct: 666 SKPSSSEVPPAEPSAPEPKPAPKPDPKPDPKPDP 699
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 777 TPGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXPXXTXG 932
TPGKP G P K P +P P P P PP P T G
Sbjct: 133 TPGKPGAPGNPGASGKGAAAPCEPSTPPPC-QPCPAGPPG---PPGPDGTPG 180
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +2
Query: 704 PRPXXKPXPPRKPAXWGLLTXXCFXPRKTEXTWGPQX*SEVXRYXGXPGFPXXXPGP 874
P P P PP P G+ P + W P R G PG P P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRP--PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +2
Query: 704 PRPXXKPXPPRKPAXWGLLTXXCFXPRKTEXTWGPQX*SEVXRYXGXPGFPXXXPGP 874
P P P PP P G+ P + W P R G PG P P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRP--PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 61 TVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 240
T DK LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 777 TPGKPNXLGAPKXDPKXXGIXXXPDSPXXXPAPXPXNPXXXNFPPXPXXTXG 932
TPGKP G P + P P P P P PP P G
Sbjct: 100 TPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQG-PPGPPGQPG 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,695,755
Number of Sequences: 27780
Number of extensions: 438445
Number of successful extensions: 1458
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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