Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N20
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    30   2.3  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical ...    30   2.3  
AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (gr...    28   9.3  

>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical
           protein Y48E1B.1 protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 355 PAPPPPPPPPPPPPPP 370



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P     P PPPP  PP P P
Sbjct: 349 PPIISPPAPPPPPPPPPPPP 368



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P   P   PPPP  PP P P
Sbjct: 350 PIISPPAPPPPPPPPPPPPP 369



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P   P P PPPP  PP   P
Sbjct: 354 PPAPPPPPPPPPPPPPPQTP 373


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 65  PPPPPPPPMCPPPPPP 80


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 2   PPPPPPPPPPPPPPPP 17


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 2   PPPPPPPPPPPPPPPP 17


>AC024838-7|AAF60820.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.2 protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 182 PKPPPPPPIPPPGPPP 197


>AC024838-3|AAF60821.1|  381|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.3 protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 771 PXPXPPPPXXPPXPXP 818
           P P PPPP  PP P P
Sbjct: 182 PKPPPPPPIPPPGPPP 197


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 757 PPXXXXXPXXPPPXXPPXPP 816
           PP     P  PPP  PP PP
Sbjct: 777 PPPFFALPVPPPPPVPPPPP 796



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P     P PPPP  PP P P
Sbjct: 778 PPFFALPVPPPPPVPPPPPP 797


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P   P   PPPP  PP P P
Sbjct: 504 PIATPSSVPPPPPPPPPPPP 523


>U39852-7|AAK39260.1|  240|Caenorhabditis elegans Ground-like (grd
           related) protein 6 protein.
          Length = 240

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 759 PXXXPXPXPPPPXXPPXPXP 818
           P   P P PPP   PP P P
Sbjct: 68  PPICPPPPPPPMPCPPPPPP 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,220,854
Number of Sequences: 27780
Number of extensions: 247104
Number of successful extensions: 1695
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)