Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N17
         (999 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       33   0.47 
05_05_0066 - 22094713-22094819,22094904-22095011,22095113-220954...    29   4.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   7.7  
03_06_0242 + 32596846-32597268                                         29   7.7  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 32.7 bits (71), Expect = 0.47
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -1

Query: 999 PPPXXKKXXXXGGXGXKXXFFXXXPPPPXXGGGGG 895
           PPP        GG G    +    PPPP  GGGGG
Sbjct: 71  PPPSYPSGGGGGGGGGTVMY--TSPPPPYSGGGGG 103



 Score = 29.9 bits (64), Expect = 3.3
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -1

Query: 999 PPPXXKKXXXXGGXGXKXXFFXXXPPPPXXGGGG 898
           PPP        GG G     +   PPP   GGGG
Sbjct: 70  PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGG 103


>05_05_0066 -
           22094713-22094819,22094904-22095011,22095113-22095437,
           22095520-22095885,22095959-22096159
          Length = 368

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +2

Query: 380 GGXGGXGVNXXXNFSPPGGXPXKTPXXFFXPPPXGXPPXPXK 505
           GG GG G+      +PPG    +     F P P G P  P +
Sbjct: 255 GGGGGGGMRAVF-LTPPGAKRERNGTGVFLPRPAGAPAEPKR 295


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 20/68 (29%), Positives = 21/68 (30%)
 Frame = -1

Query: 966 GGXGXKXXFFXXXPPPPXXGGGGGXXXXXXXXXXXXXXXXXXGXGGXFFFFFXXXKKXGG 787
           GG G     F   PP P  GGGGG                  G GG         +  GG
Sbjct: 336 GGGGGAGGVF---PPTPDLGGGGGGGGGGTKVRVCAPKDISGGGGGGGGMLDKPDEAGGG 392

Query: 786 XXXXXGGG 763
                GGG
Sbjct: 393 GGGGSGGG 400


>03_06_0242 + 32596846-32597268
          Length = 140

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = -1

Query: 498 GXGGXPXGGGKKXXXGVFXGXPPGGEKFXXX-LTPXPPXPPXFXXXPKTPP 349
           G  G P GGG     G     P  G  +    +TP PP PP     P   P
Sbjct: 9   GGRGDPSGGGGGGGVGAPPYRPAAGSVWSLPGMTPRPPGPPPKYQQPGHQP 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,386,643
Number of Sequences: 37544
Number of extensions: 484388
Number of successful extensions: 2014
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)