Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N17
         (999 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    30   3.0  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    30   3.0  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    29   6.8  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   9.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   9.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   9.1  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/54 (27%), Positives = 15/54 (27%)
 Frame = +2

Query: 767 PPXXXXXPPXXXXXXXXXXXXPPXPXXXXXXXXXXXXXXXXXXPPPPPXXGGGG 928
           PP     PP            PP P                  PPPPP  G GG
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/54 (27%), Positives = 15/54 (27%)
 Frame = +2

Query: 767 PPXXXXXPPXXXXXXXXXXXXPPXPXXXXXXXXXXXXXXXXXXPPPPPXXGGGG 928
           PP     PP            PP P                  PPPPP  G GG
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 896 PPPPPXXGGGGXXXKKXXFXPXPP 967
           PPPPP   GG    K+    P PP
Sbjct: 252 PPPPPQTDGGASSSKRQDPLPMPP 275


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -1

Query: 483 PXGGGKKXXXGVFXGXPPGGEKFXXXLTPXPPXPPXFXXXPKTPP 349
           P GG      G     PPGG        P PP PP     P  PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -1

Query: 483 PXGGGKKXXXGVFXGXPPGGEKFXXXLTPXPPXPPXFXXXPKTPP 349
           P GG      G     PPGG        P PP PP     P  PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -1

Query: 483 PXGGGKKXXXGVFXGXPPGGEKFXXXLTPXPPXPPXFXXXPKTPP 349
           P GG      G     PPGG        P PP PP     P  PP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,630,847
Number of Sequences: 27780
Number of extensions: 295309
Number of successful extensions: 1009
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)