Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N09
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical ...    34   0.12 
Z50794-2|CAA90657.2|  681|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z48009-4|CAA88084.1|  329|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AC024211-2|AAF36064.2|  152|Caenorhabditis elegans Hypothetical
           protein Y76B12C.3 protein.
          Length = 152

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
 Frame = +3

Query: 195 FVVQLLKCKFLFRMKI----TLLSVVIFCAVVALSSEYELSDIVSARIESCRGCSLNRLP 362
           F  + LKC    R+      TLL+  + C +     E++     +A +E C  C+L R P
Sbjct: 34  FNPETLKCGLCERLSDYHLETLLTDCLQCCIK--EEEFKHEKYPTAILEVCE-CNLARFP 90

Query: 363 EVKRFVMDDAPNY--DRVEVKFISGAPPELVL 452
           +V+ FV  D       +V+VK + G  P++ L
Sbjct: 91  QVQAFVHKDMARQFGGKVKVKHVRGVRPQVAL 122


>Z50794-2|CAA90657.2|  681|Caenorhabditis elegans Hypothetical
           protein F59F5.3 protein.
          Length = 681

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 107 PENYYDDCINRLYTYYIREIVCFSPPKILVC 199
           P+ Y ++C+  +Y YY  E+ CF   ++++C
Sbjct: 558 PKEYPNECLKGVYYYYSSEVYCFG--RLMLC 586


>Z48009-4|CAA88084.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.6 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 674 CTFGQKKIY*YVNTDFIWNIIVSFKEYCPKXALIKVNSNCITRCRSKVGCR 826
           C    K+ Y   N  F    ++S   +C    ++K N  C  + R KVG R
Sbjct: 175 CYIPPKESYIRANHYFTMCAVLSTINFCISTFILKYNKRCEYQTRFKVGAR 225


>AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.10 protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = -1

Query: 358 RRFNEHPRQLSIRADTMSDNSYSEDKATTAQNITTDKSVIFILNKNLHLSN 206
           R+ N   +  S   + M D +  E+KA++AQ  T++++ + ILN++L   N
Sbjct: 52  RKENVEAKTYSTLLEIMLDEA--EEKASSAQETTSEENNLKILNRDLVAEN 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,418,347
Number of Sequences: 27780
Number of extensions: 402253
Number of successful extensions: 902
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)