Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N08
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.9  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   5.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.0  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   9.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = -3

Query: 723  GAGRTXPADVAERWARTAPDG*HRR*RRGCPACSGWRSASDSQMLPSAASPSPTRQ 556
            G G T PA +  RW      G     R+  P  S  R A  S   P+ +  S   Q
Sbjct: 1426 GGGHTGPAGLISRWRDMEEGG-----RQSTPPASPARLARSSPASPTPSKKSKRHQ 1476


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +1

Query: 685 PLCNIS-WXCTTRALKAFRSQLAGWWTDMTVTG 780
           P CN + W     ALK  R  L   W + T+ G
Sbjct: 520 PECNYTFWEWLYAALKIIRDHLQVLWVNNTIIG 552


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 244 DNVCSLLPHNAVQD 285
           DN+C  LP + VQD
Sbjct: 131 DNLCQFLPQDRVQD 144


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 26   REFLRFDLSKRLRSTWFRDKINKALNTFPKMKG 124
            R +L  +   R    WF DK+  A+   PK++G
Sbjct: 1007 RAYLHTNTYVRWGDPWFWDKLRFAMPHPPKVRG 1039


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,870
Number of Sequences: 2352
Number of extensions: 17830
Number of successful extensions: 281
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)