Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N08
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   237   1e-62
U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  237 bits (579), Expect = 1e-62
 Identities = 107/154 (69%), Positives = 128/154 (83%)
 Frame = +2

Query: 149 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 328
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 329 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAG 508
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSLGQGL VA G
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSLGQGLGVATG 130

Query: 509 MAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLA 610
           MAYVGKY D+A YRV+CL+GDGE+AEGS+WE+ A
Sbjct: 131 MAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAA 164



 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
 Frame = +3

Query: 588 AASGSRWH---FASHYKLDNLVVIFDVNRLGQSEPTSLQHQLEXYDPRPEGXPVSTRXVV 758
           +A GS W    FAS YKLDNLV I DVNRLGQS+ TSL H +E Y  R      +   +V
Sbjct: 154 SAEGSVWEAAAFASIYKLDNLVAIVDVNRLGQSQATSLGHDVETYKARFAAFGFNA-IIV 212

Query: 759 DGHD 770
           +GH+
Sbjct: 213 NGHN 216


>U12965-7|AAY86205.1|  528|Caenorhabditis elegans Hypothetical
           protein F23F12.13 protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 425 LEGHPTPRLNFVDVGTGSL--GQGLAVAAGMAYVGKYFDQAPYRVYCLVG 568
           +E  PT ++  + +GT SL    G  +A  MAY+   +  APY V C +G
Sbjct: 416 VECFPT-KIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCSIG 464


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 437 PTPRLNFVDVGTGSLGQ--GLAVAAGMAYVGKYFDQAPYRVYCLVG 568
           PT R+  + +GT SL    G  +A  MAY+ + +   PY + C +G
Sbjct: 432 PT-RIRTIGIGTCSLLARIGALLAPQMAYLSEIYPPIPYIIVCSIG 476


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -3

Query: 594 MLPSAASPSPTRQYTL*GAWSKYFPTYAMPAATASPWPREPVPTST 457
           ++PS +SP P   Y +        PT   P+    P+P  P PT+T
Sbjct: 656 IVPSQSSPPPD-PYVISNPIPTLSPTAGTPSFNIYPYPSLPPPTTT 700


>Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 188 QYCRFSICWRYLLVVQSQHFCLPSFSGMYSMPY 90
           +Y    IC +  L+ QS+HF L ++SG+++  Y
Sbjct: 116 KYSYALICEKGNLIPQSEHFYLYAYSGLFNTLY 148


>Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 188 QYCRFSICWRYLLVVQSQHFCLPSFSGMYSMPY 90
           +Y    IC +  L+ QS+HF L ++SG+++  Y
Sbjct: 116 KYSYALICEKGNLIPQSEHFYLYAYSGLFNTLY 148


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = +3

Query: 387 WTS*RTCASWTRTWRATPPRDLTSWTSAPA---PWARGSPWRPAW 512
           W S  T  S   +W A P    TSW +APA    W       P W
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTW 376


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,632
Number of Sequences: 27780
Number of extensions: 375424
Number of successful extensions: 1119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)