Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N07
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588...    29   6.1  
02_05_1323 + 35700147-35701649                                         29   6.1  

>06_01_0786 -
           5881178-5881303,5881523-5881627,5882078-5882169,
           5882267-5882336,5882639-5882724,5882916-5883017,
           5883375-5883597,5883693-5883758,5883896-5883986,
           5884019-5884057,5885401-5885548,5885623-5885715,
           5885782-5885886,5886645-5886826,5886912-5887084
          Length = 566

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -3

Query: 245 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 135
           R LW+E RP  G  AV+ +  A  G       PE  A
Sbjct: 46  RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82


>02_05_1323 + 35700147-35701649
          Length = 500

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 73  SARRLTTIN*KCLRLCTITSLARLSGRAA 159
           SARR+  +N  C  +C+ TSL    GRAA
Sbjct: 140 SARRVFDVNVSCRDVCSWTSLLTAYGRAA 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,257,240
Number of Sequences: 37544
Number of extensions: 321457
Number of successful extensions: 924
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)