Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_N03
(1113 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 46 1e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 4e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 6e-04
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 40 6e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.010
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.013
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.023
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.054
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.095
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.17
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.38
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 0.60
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.6
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 6.2
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 27 6.2
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 6.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 6.2
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/44 (54%), Positives = 24/44 (54%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GG G G G GGG GG RGGG RGG R G GG RGG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGG---RGGARGGRGGRGGARGG 56
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/44 (52%), Positives = 23/44 (52%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
G G G G G GGG GG RGG RGG R G GGRGG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRG-GRGGARGGRGGSSGGRGG 66
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/43 (48%), Positives = 22/43 (51%)
Frame = -2
Query: 1061 GXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
G GRG G G GG GG RGG RGG G GG +GG
Sbjct: 29 GGGRGGARGGGRGGARGG-RGGRGGARGGRGGSSGGRGGAKGG 70
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GG G G G GG GG GG RGG R GGRGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/43 (48%), Positives = 21/43 (48%)
Frame = -2
Query: 1061 GXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
G G G G GG G RGG RGG R GG GG RGG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGAR--GGGRGGARGG 46
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXR 969
GG G G G GG GG RGG RGG +
Sbjct: 38 GGRGGARGGRGGRGGARGG-RGGSSGGRGGAK 68
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGG 996
GG G G G GG GG +GG
Sbjct: 48 GGRGGARGGRGGSSGGRGGAKGG 70
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.7 bits (91), Expect = 4e-04
Identities = 39/151 (25%), Positives = 41/151 (27%), Gaps = 12/151 (7%)
Frame = +3
Query: 126 PPPXPPPXXTXAGXXXPPPXXTXFXXXPXXXXXXXXXXXXXXXXAQ--XXXPPPPPP--P 293
PPP PPP AG PP P + PP PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 294 XRGXXXXPXGGPA--XXXXXXXXXPXXPXXXPXRXPGGXPP--XWXXXGVPPXKQPRGXR 461
R P G A P P P P PP PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 462 GXXXSFXXXGPPPPP----PPPXXXPXPXXP 542
+ PP PP PPP P P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 37.1 bits (82), Expect = 0.004
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
G P PP PP P P PP PP P P P P P P
Sbjct: 442 GAPAAPP--LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 35.9 bits (79), Expect = 0.010
Identities = 35/150 (23%), Positives = 37/150 (24%), Gaps = 11/150 (7%)
Frame = +3
Query: 126 PPPXPPPXXTXAGXXXPPPXXTXFXXXPXXXXXXXXXXXXXXXXAQXXXPPPPPPPXRGX 305
PPP PPP G + P Q PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 306 XXXPXGGPAXXXXXXXXXPXXPXXXPXR-----XPGG------XPPXWXXXGVPPXKQPR 452
P P P P R P G PP +PP P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 453 GXRGXXXSFXXXGPPPPPPPPXXXPXPXXP 542
S P PP PP P P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 33.9 bits (74), Expect = 0.041
Identities = 26/91 (28%), Positives = 27/91 (29%), Gaps = 5/91 (5%)
Frame = +3
Query: 258 AQXXXPPPPPPPXRGXXXXPXGGPAXXXXXXXXXPXXPXXXPXRXPGGXPPXWXXXGVPP 437
A PPPPPPP R P P P P G P PP
Sbjct: 306 ANKKRPPPPPPPSRRNRGKP---PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP 362
Query: 438 XKQPR-----GXRGXXXSFXXXGPPPPPPPP 515
PR G + S PP PPP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 33.9 bits (74), Expect = 0.041
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXP--PXPPPXPXPXPXPRPXPP 1065
PP PP PP P PPL P P PP P P P PP
Sbjct: 428 PPSLPPSAPP--SLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 33.5 bits (73), Expect = 0.054
Identities = 32/136 (23%), Positives = 35/136 (25%)
Frame = +2
Query: 125 PPPXPPPXXNXGXXPXXPPXXNXLXXGXXXXXXXXXXXXXXXXXXXXXXPPPPXXPXXGP 304
PPP PP N G P N PPPP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP-----P 366
Query: 305 XXXPXXGARAXXXXXXXSPPXPPXXPXXXPGXXXPPLXXGRXXPXETTPRXAGXXXLLXX 484
P G + + PP P PG P L +TP L
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL--P 424
Query: 485 XGAPPPPPPPXXXXXP 532
APP PP P
Sbjct: 425 PSAPPSLPPSAPPSLP 440
Score = 33.1 bits (72), Expect = 0.072
Identities = 34/154 (22%), Positives = 35/154 (22%), Gaps = 6/154 (3%)
Frame = +2
Query: 89 PSXXXXXSXXXXPPPXPPPXXNXGXXPXXPPXXNXL-----XXGXXXXXXXXXXXXXXXX 253
P S PPP PPP N PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 254 XXXXXXPPPPXXPXXGPXXXPXXGARAXXXXXXXSPP-XPPXXPXXXPGXXXPPLXXGRX 430
PPP P P A +PP PP P P P L G
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 431 XPXETTPRXAGXXXLLXXXGAPPPPPPPXXXXXP 532
P L A PP PP P
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXP------PPXPXPXPXPRPXP 1062
PP PP P P P+ PP P PP P P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 31.5 bits (68), Expect = 0.22
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 934 PPRPPPXXP--PXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP PPP P PP PP P P P P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 30.7 bits (66), Expect = 0.38
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +1
Query: 943 PPPXXPPXXRXPPRXRXPPP--LXPPXPPPXPXPXPXPRPXP 1062
PPP PP PP PP PPP P +P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 30.3 bits (65), Expect = 0.51
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP PP P R P R P L P PPP P P PP
Sbjct: 230 PPIPPSI--PSSRPPERV---PSLSAPAPPPIPPPSNGTVSSPP 268
Score = 29.5 bits (63), Expect = 0.88
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXP--PRXRXPPPLXPPXPPPXPXPXPXP 1050
PP PPP P P+ R PP PP P P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Frame = +1
Query: 934 PP--RPPPXXPPXXRXPPRXRXPPPL-------XPPXPPP 1026
PP R P PP P R PPPL PP PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXP---PXPPPXPXPXPXPRPXP 1062
PP P P P P PP P P PP P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP PP P R PP + P PP P PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRP 1056
P R P PP P P P PP P P P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +1
Query: 940 RPPPXXPPXXR---XPPRXRXPP-PLXPPXPPPXPXPXPXPRPXPP 1065
RPPP PP R PP PP PPP P PP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 937 PRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRP 1056
P PP P PP L P PP P P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GG G G G GGG GG GG GG GG GG GG
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 34.3 bits (75), Expect = 0.031
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GG G G G GG GG GG GG GG GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGF-GGEGHHHGGHGGFGGGPGGFEGG 236
Score = 33.9 bits (74), Expect = 0.041
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GG G G G GGG GG GGG GG G GG GG
Sbjct: 228 GGPGGFEGGPGGFGGGPGG-FGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.5 bits (63), Expect = 0.88
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
G G G G G G G GG GG G GGG GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 39.9 bits (89), Expect = 6e-04
Identities = 23/44 (52%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 1061 GXGRGXGXGXGXGGGXGGXRGG-GXRXRGGXRXXGGXXGGGRGG 933
G RG G GG GG RGG G RGG R GG GG RGG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR--GGFRGGSRGG 189
Score = 35.9 bits (79), Expect = 0.010
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 1052 RGXGXGXGXGGGXGGXRGGGXRXRG--GXRXXGGXXGGGRGG 933
+G G GG GG RGG RG G GG GG RGG
Sbjct: 128 KGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/41 (48%), Positives = 20/41 (48%)
Frame = -2
Query: 1055 GRGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
GRG G G GG G GGG R G GG GG RGG
Sbjct: 146 GRGGSRG-GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 34.7 bits (76), Expect = 0.023
Identities = 23/46 (50%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGX-RGG-GXRXRGGXRXXGGXXGGGRGG 933
GG G G G GG GG RGG G RGG GG GG RGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGF--GGGSRGGSRGG 181
Score = 33.5 bits (73), Expect = 0.054
Identities = 25/47 (53%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGG-GXRXRGGXRXXG-GXXGGG-RGG 933
G GRG G G G GG GG RGG G RGG G GGG RGG
Sbjct: 133 GPAGRG-GRG-GFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.010
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
G P P PP P+ PP + P PPP P P P PP
Sbjct: 1680 GMAPAHPVSTPPVR---PQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +1
Query: 943 PPPXXPPXXRXPPRXRXPPPLXPPXP--PPXPXPXPXPRPXPP 1065
PP P PP PPP PP P PP P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 33.9 bits (74), Expect = 0.041
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRP 1056
PP PP PP PP PP PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSA-PPPPLPASSAPSVPNP 1746
Score = 33.1 bits (72), Expect = 0.072
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 937 PRPPPXXPPXXRXPPRXRXPPPLXPPX--PPPXPXPXPXPRPXP 1062
P PPP PP PP P P PP PPP P P P
Sbjct: 1705 PTPPP--PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP P P P PP PP P P P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.51
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 937 PRPPPXXPPXXRXPPRXRXPPPLXPP---XPPPXPXPXPXPRPXPP 1065
P P P PP+ P P PP PPP P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Frame = +3
Query: 492 PPPP---PPPPXXXPXPXXP 542
PPPP PPPP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGP 1727
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.013
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP P P PPR PPP PP P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 32.7 bits (71), Expect = 0.095
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
P P P P PP P P PP P P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRP 1056
PPRP P PP PP+ PPP P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 943 PPPXXPPXX-RXPPRXRXPPPLXPPXPPPXPXP 1038
PPP P + PP P PP PP P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRX-RXPPPLXPPXPPPXPXPXP-XPRPXPP 1065
PP P P + PP PPP P P P P P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +1
Query: 934 PPRPPPXXP-PXXRXPPRXRXPPPLXPPXPPPXP---XPXPXPRPXPP 1065
PP P P P PP P PP P P P P P PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +2
Query: 272 PPPPXXPXXGPXXXPXXGARAXXXXXXXSPPXPPXXPXXXP 394
PP P P P P ++A PP P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 492 PPPPPPPPXXXPXPXXP 542
P PPPPPP P P
Sbjct: 3 PAPPPPPPAPAPAAAAP 19
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.023
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLX----PPXPPPXPX---PXPXPRPXPP 1065
PP PPP P PPP PP PPP P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.9 bits (74), Expect = 0.041
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 405 PPXWXXXGVPPXKQPRGXRGXXXSFXXXGPPPPPPPP 515
PP G PP P G G GPPPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGA-------GPPPPPPPP 782
Score = 33.1 bits (72), Expect = 0.072
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
Frame = +1
Query: 940 RPPPXXPPXXRXPPRXRXPPPLXPPXP----PPXPXPXP-----XPRPXPP 1065
+ PP PP P P P+ PP P PP P P P P P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 937 PRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXP 1044
P P P P PP PP + PPP P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.38
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
G PP PPP PP PPP P P P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.7 bits (66), Expect = 0.38
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 126 PPPXPPPXXTXAGXXXPPP 182
PPP PPP AG PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 90 LPXXXXXXXLXXPPPXPPPXXTXAGXXXPPP 182
+P + PPP PPP AG PPP
Sbjct: 749 IPVPPPAPIMGGPPPPPPPPGV-AGAGPPPP 778
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 125 PPPXPPPXXNXGXXPXXPP 181
PPP PPP G P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP 779
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +3
Query: 117 LXXPPPXPPPXXTXAGXXXPPPXXTXFXXXPXXXXXXXXXXXXXXXXAQXXXPPPPPPP 293
L PPP PP P P P A PPPPPPP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPP-----PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 33.5 bits (73), Expect = 0.054
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -2
Query: 1055 GRGXGXGXGXGGGXGGXRGGGXRXRGGXR 969
GRG G G GG GG GG R RGG R
Sbjct: 452 GRGGFGGRGGFGGRGGFGGGRGRGRGGAR 480
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 1043 GXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
G G G G G RGG GG GG G GRGG
Sbjct: 446 GGGSRGGRGGFGGRGG----FGGRGGFGGGRGRGRGG 478
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 1064 GGXGRGXGXGXGXGGGXGGXRGG 996
GG G G G G GGG G RGG
Sbjct: 457 GGRG-GFGGRGGFGGGRGRGRGG 478
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.095
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
G PP PPP P P PP P PP P P P P
Sbjct: 1187 GVPPVPPPSEAPPV-PKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 32.7 bits (71), Expect = 0.095
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXP 1038
G PP PPP P P P P+ PP P P
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.38
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXP--PRXRXPPPLXPPXP-PPXPXPXPXPRPXP 1062
G P PPP P P P PP+ P PP P P P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 30.7 bits (66), Expect = 0.38
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXPP 1065
PP P P P P P P PP P P P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 30.3 bits (65), Expect = 0.51
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
G PP P P P PP P PP P P P P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 30.3 bits (65), Expect = 0.51
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +1
Query: 928 GXPPRPPPXX-----PPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRP 1056
G PP P P PP PP + P PP PPP P P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPK-PSVGVPPVPPPSTAP-PVPTP 1222
Score = 29.5 bits (63), Expect = 0.88
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 10/56 (17%)
Frame = +1
Query: 928 GXPPRP------PPXXPPXXRXPPRXRXP---PPLXPPXP-PPXPXPXPXPRPXPP 1065
G PP P PP P PP + PP+ PP PP P P P PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 29.1 bits (62), Expect = 1.2
Identities = 34/143 (23%), Positives = 35/143 (24%), Gaps = 7/143 (4%)
Frame = +3
Query: 126 PPPXPPPXXTXAGXXXP---PPXXTXFXXXPXXXXXXXXXXXXXXXXAQXXXPPP---PP 287
PPP P P P PP P A P P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 288 PPXRGXXXXPXGGPAXXXXXXXXXPXXPXXXPXRXPGGXPPX-WXXXGVPPXKQPRGXRG 464
P P P+ P P P G PP PP P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAP---PVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 465 XXXSFXXXGPPPPPPPPXXXPXP 533
G PP PPP P P
Sbjct: 1180 PVPK-PAAGVPPVPPPSEAPPVP 1201
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXP---XPXPRP 1056
G PP P P P P P P PP P P P P+P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/83 (25%), Positives = 23/83 (27%), Gaps = 3/83 (3%)
Frame = +2
Query: 272 PPPPXXPXXGPXXXPXXGARAXXXXXXXSPPXPPXX---PXXXPGXXXPPLXXGRXXPXE 442
PP P P GA +PP P P P PP+ P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 443 TTPRXAGXXXLLXXXGAPPPPPP 511
P A G PP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
PP P P P P P P+ P PP P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPV-PSGAPPVPKPSVAAPPVP 1153
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
PP P P PP P P PP P P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXP---XPXPRP 1056
G PP P P P P P PP P P P P+P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 928 GXPPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXPXPXPXPRPXP 1062
G PP P P P P P PP P P P P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 26.6 bits (56), Expect = 6.2
Identities = 22/84 (26%), Positives = 23/84 (27%)
Frame = +3
Query: 282 PPPPXRGXXXXPXGGPAXXXXXXXXXPXXPXXXPXRXPGGXPPXWXXXGVPPXKQPRGXR 461
PP P P P+ P P G P GVPP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV-PAPSSGIPPVPKPAAGVPPVPPPS--E 1196
Query: 462 GXXXSFXXXGPPPPPPPPXXXPXP 533
G PP PPP P P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXPPPXP--XPXPXPRPXPP 1065
P PP P PP P PP P P P P P PP
Sbjct: 1155 PSGAPPVPKPSVAAPP-VPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.17
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 997 PPLXPPXPPPXPXPXPXPRPXPP 1065
PP PP PPP P P +P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 946 PPXXPPXXRXPPRXRXPPPLXPPXPPP 1026
PP PP PP PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFE-PPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.67
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 474 SFXXXGPPPPPPPPXXXPXPXXP 542
S PPPPPPPP P P
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPP 25
Score = 29.5 bits (63), Expect = 0.88
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPP 1014
P PPP PP PP PPP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP--PP 30
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 994 PPPLXPPXPPPXPXPXPXPRPXPP 1065
PP PP PPP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 994 PPPLXPPXPPPXPXPXPXPRPXPP 1065
PPP PP PP P P P PP
Sbjct: 9 PPP--PPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 976 PPRXRXPPPLXPPXPPPXPXPXPXP 1050
PP PPP P PP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 979 PRXRXPPPLXPPX--PPPXPXPXPXP 1050
P PPP PP PP P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = +3
Query: 492 PPPPPP----PPXXXPXPXXPXWXXXR 560
PPPPPP PP P P P + R
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 25.8 bits (54), Expect(2) = 0.25
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 126 PPPXPPPXXTXAGXXXPPP 182
PPP PPP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 23.8 bits (49), Expect(2) = 0.25
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 273 PPPPPPP 293
PPPPPPP
Sbjct: 24 PPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.38
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 943 PPPXXPPXXRXPPRXRXPPPLXPPXPPPXP 1032
PPP P P P PP PPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 432 PPXKQPRGXRGXXXSFXXX-GPPPPPPPP 515
PP QP S PPPPPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 25.0 bits (52), Expect(2) = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 934 PP--RPPPXXPPXXRXPPRXRXPPPLXPPXPP 1023
PP +PP P P PPP PP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPP--PPPPP 197
Score = 21.8 bits (44), Expect(2) = 1.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 1000 PLXPPXPPPXPXPXP 1044
PL P PPP P P
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 24.2 bits (50), Expect(2) = 0.60
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 258 AQXXXPPPPPPP 293
A PPPPPPP
Sbjct: 301 ANGGLPPPPPPP 312
Score = 24.2 bits (50), Expect(2) = 0.60
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 273 PPPPPPPXRGXXXXPXGGPA 332
PPPPPPP PA
Sbjct: 307 PPPPPPPPSNDFWKDSNEPA 326
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +1
Query: 934 PPRPPPXXPPXXRXPPRXRXPPPLXPPXP----PPXPXPXPXPRPXPP 1065
P P P PP P P P PP P P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPV-PEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +3
Query: 405 PPXWXXXGVPPXKQPRGXRGXXXSFXXXGPPPPPPP 512
P + G P R + PPPPPPP
Sbjct: 342 PAPFFPLGFSPHLNDESSRSRWSNISYSPPPPPPPP 377
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 491 APPPPPPP 514
+PPPPPPP
Sbjct: 369 SPPPPPPP 376
Score = 21.4 bits (43), Expect(2) = 3.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 494 PPPPPPPXXXXXP 532
PPPPPP P
Sbjct: 372 PPPPPPELLNHSP 384
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 1052 RGXGXGXGXGGGXGGXRGGGXRXRGGXRXXGGXXGGGRGG 933
RG G GGG G G GG GG GGRGG
Sbjct: 103 RGPLFGPRIGGGHHGPLHG---PHGGFGGRGGGRMGGRGG 139
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 1022 GGXGGXRGGGXRXRGGXRXXGGXXGGGRG 936
GG GG G RGG R GG RG
Sbjct: 508 GGRGGNYRRGGYGRGGFRRGGGYGNRNRG 536
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 6.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 492 PPPPPPPP 515
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,932,167
Number of Sequences: 5004
Number of extensions: 35942
Number of successful extensions: 838
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 589685872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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