Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_N02
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   7.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 240 FNFFPQFLNCFLRTLSQRIYAIVFFRSIS 154
           F   P+ +    +T  Q+ YA+ FF ++S
Sbjct: 16  FALTPRSIKLEKQTFIQKFYAVAFFLALS 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = +2

Query: 803  PFWXFXPXXPPLPPXPPSXPXP 868
            P W      PP+PP     P P
Sbjct: 1367 PEWQPTEWHPPIPPTSEKPPLP 1388


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 422 KFXMXXTPPPXPPXXPTTXPXPXKXPGARRI 514
           K  +  T PP P   P     P K   ++RI
Sbjct: 90  KVSVSPTTPPTPSPPPEERLTPSKDASSKRI 120


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 321 LQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 196
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,195
Number of Sequences: 336
Number of extensions: 3127
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)