Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M24
         (1127 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   9.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   9.8  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
            protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 978  PPPPPTPXXPIXPPT 1022
            P  PP P  PI PPT
Sbjct: 178  PQVPPLPLPPIFPPT 192


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 518 PPPPPPXXPPP 550
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 518 PPPPPPXXPPP 550
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 518 PPPPPPXXPPPXXXLXP 568
           P  PP   PPP   L P
Sbjct: 95  PTTPPTPSPPPEERLTP 111


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 631 AXGGGGGXGXXFXGPP 584
           A GGGGG G     PP
Sbjct: 522 AKGGGGGSGSGNNQPP 537


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,160
Number of Sequences: 336
Number of extensions: 1798
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 32681749
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)