Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M23
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.47 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 21/88 (23%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
 Frame = +2

Query: 626 ESAPPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPP-K 802
           + A P PG     + + PP     P       P P R  G             P  PP  
Sbjct: 177 DPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGA 236

Query: 803 XRGITPGXXPX*PQXAPXKAPEPLXKXP 886
             G+ PG  P  P     + P  + + P
Sbjct: 237 VPGMQPGMQPRPPSAQGMQRPPMMGQPP 264


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -1

Query: 753 PXXPAXRKGPGGPXXXKXGXGNXXGGPKKRQTXLFPGGGGA 631
           P  P  RKGP GP       G+  G P        PG  GA
Sbjct: 708 PQLPPQRKGPPGPPGFNGPKGD-KGLPGLAGPAGIPGAPGA 747


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,545
Number of Sequences: 2352
Number of extensions: 8879
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)