Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M23
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.024
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.024
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.90
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 31 0.90
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 31 0.90
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.90
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.90
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.90
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.90
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 30 2.8
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.024
Identities = 24/77 (31%), Positives = 26/77 (33%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPPPG+ G P P P GPPG GG P PP+
Sbjct: 301 PPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 815 TPGXXPX*PQXAPXKAP 865
PG P P P P
Sbjct: 359 GPGMYPPPPPSRPPAPP 375
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXG---PPGPFRXAGXXGXXXPXXGGXIPXFPPKX 805
PPPP R +G P P + G PP P R P P PP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Query: 806 RGITPGXXP 832
G+ P P
Sbjct: 378 HGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.024
Identities = 24/77 (31%), Positives = 26/77 (33%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPPPG+ G P P P GPPG GG P PP+
Sbjct: 311 PPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 815 TPGXXPX*PQXAPXKAP 865
PG P P P P
Sbjct: 369 GPGMYPPPPPSRPPAPP 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXG---PPGPFRXAGXXGXXXPXXGGXIPXFPPKX 805
PPPP R +G P P + G PP P R P P PP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Query: 806 RGITPGXXP 832
G+ P P
Sbjct: 388 HGMIPPPPP 396
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPP + GP P P + G P P G P G P PP G+
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
Query: 815 TP 820
P
Sbjct: 126 AP 127
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXP--XXGGXIPXFPPKXR 808
P PPG R GPP P GPPGP G G P G P PP
Sbjct: 217 PGPPGPRGPK---GPPGSNGLPS-QNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDS 272
Query: 809 GITPGXXP 832
G G P
Sbjct: 273 GEPGGHCP 280
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXP--XXGGXIPXFPPKXR 808
P PPG R GPP P GPPGP G G P G P PP
Sbjct: 217 PGPPGPRGPK---GPPGSNGLPS-QNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDS 272
Query: 809 GITPGXXP 832
G G P
Sbjct: 273 GEPGGHCP 280
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 759 PXPPXXGXYXVS-----PQXPGGLPXXXXLXDPKXPPXRPXNPXXXAPXXGXFPXXAXPP 923
P PP G ++ P PGGLP P PP P P G F PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/88 (29%), Positives = 31/88 (35%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPPP + G P P P PP P G G P + F P +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM--FAP-MAPV 799
Query: 815 TPGXXPX*PQXAPXKAPEPLXKXPXXWG 898
P P P+ P K P+ K P WG
Sbjct: 800 IPDYLP--PKKVP-KVDGPMRKFP--WG 822
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 759 PXPPXXGXYXVS-----PQXPGGLPXXXXLXDPKXPPXRPXNPXXXAPXXGXFPXXAXPP 923
P PP G ++ P PGGLP P PP P P G F PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/88 (29%), Positives = 31/88 (35%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPPP + G P P P PP P G G P + F P +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM--FAP-MAPV 799
Query: 815 TPGXXPX*PQXAPXKAPEPLXKXPXXWG 898
P P P+ P K P+ K P WG
Sbjct: 800 IPDYLP--PKKVP-KVDGPMRKFP--WG 822
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 759 PXPPXXGXYXVS-----PQXPGGLPXXXXLXDPKXPPXRPXNPXXXAPXXGXFPXXAXPP 923
P PP G ++ P PGGLP P PP P P G F PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/88 (29%), Positives = 31/88 (35%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPPP + G P P P PP P G G P + F P +
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM--FAP-MAPV 382
Query: 815 TPGXXPX*PQXAPXKAPEPLXKXPXXWG 898
P P P+ P K P+ K P WG
Sbjct: 383 IPDYLP--PKKVP-KVDGPMRKFP--WG 405
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/77 (31%), Positives = 29/77 (37%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPP G G P P P PP P R + G P G P PP G
Sbjct: 274 PPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG- 327
Query: 815 TPGXXPX*PQXAPXKAP 865
+P P + AP ++P
Sbjct: 328 SPPPPPRQKRQAPERSP 344
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/77 (31%), Positives = 29/77 (37%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPP G G P P P PP P R + G P G P PP G
Sbjct: 295 PPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG- 348
Query: 815 TPGXXPX*PQXAPXKAP 865
+P P + AP ++P
Sbjct: 349 SPPPPPRQKRQAPERSP 365
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/77 (31%), Positives = 29/77 (37%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPKXRGI 814
PPP G G P P P PP P R + G P G P PP G
Sbjct: 280 PPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG- 333
Query: 815 TPGXXPX*PQXAPXKAP 865
+P P + AP ++P
Sbjct: 334 SPPPPPRQKRQAPERSP 350
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Frame = +3
Query: 711 PXXPRVLS-GLXXXRVSPXPPXXGXYXVSPQXP------GGLPXXXXLXDPKXPPXRPXN 869
P RV S GL R P PP G ++P P G P P PP P
Sbjct: 559 PPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 618
Query: 870 PXXXAPXXGXFPXXAXPP 923
AP P PP
Sbjct: 619 SFGMAPISSAAPPPPPPP 636
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Frame = +3
Query: 711 PXXPRVLS-GLXXXRVSPXPPXXGXYXVSPQXP------GGLPXXXXLXDPKXPPXRPXN 869
P RV S GL R P PP G ++P P G P P PP P
Sbjct: 385 PPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQ 444
Query: 870 PXXXAPXXGXFPXXAXPP 923
AP P PP
Sbjct: 445 SFGMAPISSAAPPPPPPP 462
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Frame = +2
Query: 629 SAPPPPGKRXVXRFLGPPSXXPXPHL-----XXXGPPGPFRXAGXXGXXXPXXGGXIPXF 793
+ P PP R + G P P P+L GPPGP G G P
Sbjct: 71 AGPVPPRNRTTRQAYGGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGT 130
Query: 794 PPKXRGITPGXXPX*PQXAPXKAPEP 871
P K P P P P P P
Sbjct: 131 PGK-----PPVAPCEPTTPPPCKPCP 151
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Frame = +2
Query: 629 SAPPPPGKRXVXRFLGPPSXXPXPHL-----XXXGPPGPFRXAGXXGXXXPXXGGXIPXF 793
+ P PP R + G P P P+L GPPGP G G P
Sbjct: 66 AGPVPPRNRTTRQAYGGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGT 125
Query: 794 PPKXRGITPGXXPX*PQXAPXKAPEP 871
P K P P P P P P
Sbjct: 126 PGK-----PPVAPCEPTTPPPCKPCP 146
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Frame = +2
Query: 629 SAPPPPGKRXVXRFLGPPSXXPXPHL-----XXXGPPGPFRXAGXXGXXXPXXGGXIPXF 793
+ P PP R + G P P P+L GPPGP G G P
Sbjct: 66 AGPVPPRNRTTRQAYGGPEVNPAPNLQCEGCCLPGPPGPAGAPGKPGKPGRPGAPGTPGT 125
Query: 794 PPKXRGITPGXXPX*PQXAPXKAPEP 871
P K P P P P P P
Sbjct: 126 PGK-----PPVAPCEPTTPPPCKPCP 146
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +2
Query: 635 PPPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIP-XFPPKXRG 811
PPPPG GPP P GPP P G G P G P PP
Sbjct: 411 PPPPGGPGAPGSYGPPQGGP----GGFGPPPP----GGPGAYGPPPTGFPPVGAPPPGAA 462
Query: 812 ITPGXXP 832
PG P
Sbjct: 463 GAPGGNP 469
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = -1
Query: 924 GGGXPXGGXPXXXGXXXRGSG--AFXGAXWGQXGFXPGVIPRXFGGKXGIXPPXXGXXXP 751
GG P GG G +G G +F + Q PG +P G P P
Sbjct: 225 GGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAMSAPGYPPQQGQFGAP 284
Query: 750 XXPAXRKGPGG 718
GPGG
Sbjct: 285 NNAGYGYGPGG 295
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = -1
Query: 924 GGGXPXGGXPXXXGXXXRGSG--AFXGAXWGQXGFXPGVIPRXFGGKXGIXPPXXGXXXP 751
GG P GG G +G G +F + Q PG +P G P P
Sbjct: 242 GGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAMSAPGYPPQQGQFGAP 301
Query: 750 XXPAXRKGPGG 718
GPGG
Sbjct: 302 NNAGYGYGPGG 312
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = +2
Query: 638 PPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXF--PPKXRG 811
PPP + R + PP P PH GPP F GG P F PP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHF-GMGPPRGFM---PPPHPMMFRGGPYPPFFPPPPPHF 360
Query: 812 ITPGXXP 832
+ P P
Sbjct: 361 MRPSSPP 367
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = +2
Query: 638 PPPGKRXVXRFLGPPSXXPXPHLXXXGPPGPFRXAGXXGXXXPXXGGXIPXF--PPKXRG 811
PPP + R + PP P PH GPP F GG P F PP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHF-GMGPPRGFM---PPPHPMMFRGGPYPPFFPPPPPHF 360
Query: 812 ITPGXXP 832
+ P P
Sbjct: 361 MRPSSPP 367
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 4/101 (3%)
Frame = -1
Query: 927 SGGGXPXGGXPXXXGXXXRGSGAFXGAXWGQXGFXPGVIPRXFGG----KXGIXPPXXGX 760
SGGG GG G G G + G G G G GG PP
Sbjct: 250 SGGGYSSGGSSGG-GYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Query: 759 XXPXXPAXRKGPGGPXXXKXGXGNXXGGPKKRQTXLFPGGG 637
P PA GG G G + GGG
Sbjct: 309 PPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 4/101 (3%)
Frame = -1
Query: 927 SGGGXPXGGXPXXXGXXXRGSGAFXGAXWGQXGFXPGVIPRXFGG----KXGIXPPXXGX 760
SGGG GG G G G + G G G G GG PP
Sbjct: 250 SGGGYSSGGSSGG-GYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Query: 759 XXPXXPAXRKGPGGPXXXKXGXGNXXGGPKKRQTXLFPGGG 637
P PA GG G G + GGG
Sbjct: 309 PPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGG 349
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/83 (28%), Positives = 28/83 (33%)
Frame = -1
Query: 924 GGGXPXGGXPXXXGXXXRGSGAFXGAXWGQXGFXPGVIPRXFGGKXGIXPPXXGXXXPXX 745
GGG GG G G G F G G G+ G+ +GG G+ G
Sbjct: 166 GGGGMGGGGYGGGGDGGYGGGGFGGG--GMGGYGGGMGGGGYGG-GGMGGGGYGGGGDGG 222
Query: 744 PAXRKGPGGPXXXKXGXGNXXGG 676
G GG G G GG
Sbjct: 223 YGPSGGYGGGYGPGGGYGMGGGG 245
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 822 PGVIPRXFGGKXGIXPPXXGXXXPXXPAXRKGPGGP 715
P P GG+ PP G P P R PG P
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 822 PGVIPRXFGGKXGIXPPXXGXXXPXXPAXRKGPGGP 715
P P GG+ PP G P P R PG P
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 626 ESAPPPPGKRXVXRFLGPPSXXPXP-HLXXXGPPGPFRXAGXXGXXXPXXGGXIPXFPPK 802
+ P PPGK GPP P G PGP G G P G PP
Sbjct: 236 QGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRG--PPGQPGSCDHCPPP 293
Query: 803 XRG 811
G
Sbjct: 294 RTG 296
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 822 PGVIPRXFGGKXGIXPPXXGXXXPXXPAXRKGPGGP 715
P P GG+ PP G P P R PG P
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 822 PGVIPRXFGGKXGIXPPXXGXXXPXXPAXRKGPGGP 715
P P GG+ PP G P P R PG P
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,955,319
Number of Sequences: 27780
Number of extensions: 232753
Number of successful extensions: 893
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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