Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M19
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 35 0.079
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 0.089
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 0.089
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 32 0.42
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.42
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 32 0.42
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 25 0.54
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 0.98
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.9
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 25 4.2
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 25 4.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 25 4.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 25 4.7
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 25 5.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 6.7
AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical ... 28 6.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 25 8.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 23 9.6
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 23 10.0
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 398 PRGGXKKXFXXPPPPPPXPXFXXGGGGKKXP 306
P GG PPPPPP P GGGG P
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGGGLALP 50
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 319 PPPPXXKXGXGGGGG 363
PPPP G GGGGG
Sbjct: 32 PPPPPSPCGCGGGGG 46
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect(2) = 0.089
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGG 318
PPPPPP P GGG
Sbjct: 307 PPPPPPAPAPVSSGGG 322
Score = 25.4 bits (53), Expect(2) = 0.089
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 392 GGXKKXFXXPPPPPPXP 342
GG PPPPPP P
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect(2) = 0.089
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGG 318
PPPPPP P GGG
Sbjct: 307 PPPPPPAPAPVSSGGG 322
Score = 25.4 bits (53), Expect(2) = 0.089
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 392 GGXKKXFXXPPPPPPXP 342
GG PPPPPP P
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 374 FXXPPPPPPXPXFXXGGGGKKXP 306
+ PPPPPP P F GGG P
Sbjct: 62 YGAPPPPPPPPAFGGLGGGAAYP 84
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 64 APPPPPPPP 72
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP G
Sbjct: 66 PPPPPPPAFG 75
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 374 FXXPPPPPPXPXFXXGGGGKKXP 306
+ PPPPPP P F GGG P
Sbjct: 62 YGAPPPPPPPPAFGGLGGGAAYP 84
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 64 APPPPPPPP 72
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP G
Sbjct: 66 PPPPPPPAFG 75
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 374 FXXPPPPPPXPXFXXGGGGKKXP 306
+ PPPPPP P F GGG P
Sbjct: 62 YGAPPPPPPPPAFGGLGGGAAYP 84
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 64 APPPPPPPP 72
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP G
Sbjct: 66 PPPPPPPAFG 75
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 25.4 bits (53), Expect(2) = 0.54
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP P G
Sbjct: 589 PPPPPPPPGG 598
Score = 25.0 bits (52), Expect(2) = 0.54
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 575 APPPPPPPP 583
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 365 PPPPPPXP 342
PPPPPP P
Sbjct: 562 PPPPPPLP 569
Score = 22.6 bits (46), Expect(2) = 9.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 362 PPPPPXPXFXXGG 324
PPPPP P GG
Sbjct: 576 PPPPPPPPPMLGG 588
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 398 PRGGXKKXFXXPPPPPPXPXFXXGGGGKKXP 306
P GG PPPPPP GGGG P
Sbjct: 20 PSGGGGGCGCAPPPPPPACGCGGGGGGYAAP 50
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 319 PPPPXXKXGXGGGGGG 366
PPPP G GGGGGG
Sbjct: 31 PPPPPPACGCGGGGGG 46
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 319 PPPPXXKXGXGGGGGG 366
PPPP G GGGGGG
Sbjct: 56 PPPPACGGGCGGGGGG 71
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 319 PPPPXXKXGXGGGGGG 366
PPPP G GGGGGG
Sbjct: 113 PPPPACGGGCGGGGGG 128
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGGKKXP 306
PPPPPP P GG G P
Sbjct: 63 PPPPPPPPAPIGGGAGYAAP 82
Score = 25.4 bits (53), Expect(2) = 7.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP P G
Sbjct: 65 PPPPPPAPIG 74
Score = 21.0 bits (42), Expect(2) = 7.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 645 APPPPPPXP 671
A PPPPP P
Sbjct: 61 ALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGGKKXP 306
PPPPPP P GG G P
Sbjct: 63 PPPPPPPPAPIGGGAGYAAP 82
Score = 25.4 bits (53), Expect(2) = 7.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP P G
Sbjct: 65 PPPPPPAPIG 74
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 645 APPPPPPXP 671
A PPPPP P
Sbjct: 61 ALPPPPPPP 69
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 25.0 bits (52), Expect(2) = 4.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 539 APPPPPPPP 547
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP G
Sbjct: 542 PPPPPPTQIG 551
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 187 APPPPPPPP 195
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPP P G
Sbjct: 191 PPPPPQNPRG 200
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 187 APPPPPPPP 195
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPP P G
Sbjct: 191 PPPPPQNPRG 200
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 187 APPPPPPPP 195
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPP P G
Sbjct: 191 PPPPPQNPRG 200
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGGKKXPXXXXXF 288
PPPPPP P G + P F
Sbjct: 66 PPPPPPPPQCGCGRKKRSLPEKPTFF 91
Score = 22.2 bits (45), Expect(2) = 5.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 392 GGXKKXFXXPPPPPP 348
GG PPPPPP
Sbjct: 59 GGYGCGIPPPPPPPP 73
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 365 PPPPPPXPXFXXGGGGKK 312
PPPPPP P G G KK
Sbjct: 53 PPPPPPPPMCGCGCGRKK 70
Score = 25.0 bits (52), Expect(2) = 6.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 645 APPPPPPXP 671
APPPPPP P
Sbjct: 50 APPPPPPPP 58
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 648 PPPPPPXPXG 677
PPPPPP G
Sbjct: 54 PPPPPPPMCG 63
>AL008868-1|CAA15515.2| 213|Caenorhabditis elegans Hypothetical
protein C53C7.3 protein.
Length = 213
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1
Query: 460 PPPPPPPXFF 431
PPPPPPP FF
Sbjct: 176 PPPPPPPAFF 185
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 24.6 bits (51), Expect(2) = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 325 PPXXKXGXGGGGGG 366
PP G GGGGGG
Sbjct: 181 PPSNDFGPGGGGGG 194
Score = 21.8 bits (44), Expect(2) = 8.1
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 343 GXGGGGGGXKXXFXSPP 393
G GG GG F PP
Sbjct: 199 GGSGGSGGGSGRFPPPP 215
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.4 bits (53), Expect(2) = 9.4
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -3
Query: 362 PPPPPXPXFXXGGGGKKXPXXXXXFP 285
PPPPP P GG P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVP 147
Score = 20.6 bits (41), Expect(2) = 9.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 398 PRGGXKKXFXXPPPPP 351
P+ G + PPPPP
Sbjct: 113 PQHGDHEASPPPPPPP 128
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 648 PPPPPPXP 671
PPPPPP P
Sbjct: 751 PPPPPPQP 758
Score = 22.6 bits (46), Expect(2) = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 645 APPPPPP 665
APPPPPP
Sbjct: 749 APPPPPP 755
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 23.4 bits (48), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 648 PPPPPPXP 671
PPPPPP P
Sbjct: 71 PPPPPPKP 78
Score = 22.6 bits (46), Expect(2) = 10.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 645 APPPPPP 665
APPPPPP
Sbjct: 69 APPPPPP 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,402,773
Number of Sequences: 27780
Number of extensions: 202790
Number of successful extensions: 4978
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3835
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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