Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M18
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 36 0.039
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 36 0.039
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 36 0.039
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 36 0.039
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 36 0.039
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 36 0.039
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.052
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 36 0.052
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.052
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.052
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 36 0.052
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.052
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 34 0.12
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 29 5.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 5.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 5.9
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2295 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2351
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2352 VYTLTITNSEG 2362
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2212 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2268
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2269 VYTLTITNSEG 2279
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2533 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2589
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2590 VYTLTITNSEG 2600
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2533 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2589
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2590 VYTLTITNSEG 2600
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2533 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2589
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2590 VYTLTITNSEG 2600
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 325 GRPFNLNCTLAVPLD-SFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G P +L T D ++VW+KN PLG + ++EL G +NED G
Sbjct: 2228 GVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHEL---GWATLDISSANEDHNG 2284
Query: 502 XYTCGLKNQTG 534
YT + N G
Sbjct: 2285 VYTLTITNSEG 2295
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 5397 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 5452
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 5453 AYRCVATNAHGTI 5465
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 4757 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 4812
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 4813 AYRCVATNAHGTI 4825
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 5397 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 5452
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 5453 AYRCVATNAHGTI 5465
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 5397 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 5452
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 5453 AYRCVATNAHGTI 5465
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 4757 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 4812
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 4813 AYRCVATNAHGTI 4825
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 35.5 bits (78), Expect = 0.052
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 325 GRPFNLNCTL-AVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYG 501
G+P L+C + A+P S +VW K+ +PL + +YE G S E+D G
Sbjct: 5397 GQPIRLSCKVDAIPRAS--VVWYKDGLPLRADSRTSIQYE--EDGTATLAINDSTEEDIG 5452
Query: 502 XYTCGLKNQTGHI 540
Y C N G I
Sbjct: 5453 AYRCVATNAHGTI 5465
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 358 VPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
V L F+I W K +PL E + + L N LT R +ED YTC N G
Sbjct: 1850 VSLGDFQITWMKQGLPLTENDAI---FTLDNTRLTILNANRDHED---IYTCVANNTAGQ 1903
Query: 538 IT 543
++
Sbjct: 1904 VS 1905
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 319 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDY 498
I G+ L+C + + IVW K+ P+ E +++ G ++ G N D
Sbjct: 899 IEGQDLTLSCVVVLGTPKPSIVWIKDDKPVEE----GPTIKIEGGGSLLRLRG-GNPKDE 953
Query: 499 GXYTCGLKNQTGHIT 543
G YTC + G+ T
Sbjct: 954 GKYTCIAVSPAGNST 968
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 331 PFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYT 510
P +NC ++ ++ W + PL + YEL N G T +I RS + G YT
Sbjct: 2685 PVEINCVVSGSPHP-KVYWLFDDKPLEPDSAA---YELTNNGETLKIV-RSQVEHAGTYT 2739
Query: 511 CGLKNQTG 534
C +N G
Sbjct: 2740 CEAQNNVG 2747
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 358 VPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
V L F+I W K +PL E + + L N LT R +ED YTC N G
Sbjct: 1850 VSLGDFQITWMKQGLPLTENDAI---FTLDNTRLTILNANRDHED---IYTCVANNTAGQ 1903
Query: 538 IT 543
++
Sbjct: 1904 VS 1905
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 319 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDY 498
I G+ L+C + + IVW K+ P+ E +++ G ++ G N D
Sbjct: 899 IEGQDLTLSCVVVLGTPKPSIVWIKDDKPVEE----GPTIKIEGGGSLLRLRG-GNPKDE 953
Query: 499 GXYTCGLKNQTGHIT 543
G YTC + G+ T
Sbjct: 954 GKYTCIAVSPAGNST 968
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 331 PFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYT 510
P +NC ++ ++ W + PL + YEL N G T +I RS + G YT
Sbjct: 2685 PVEINCVVSGSPHP-KVYWLFDDKPLEPDSAA---YELTNNGETLKIV-RSQVEHAGTYT 2739
Query: 511 CGLKNQTG 534
C +N G
Sbjct: 2740 CEAQNNVG 2747
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 358 VPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
V L F+I W K +PL E + + L N LT R +ED YTC N G
Sbjct: 1850 VSLGDFQITWMKQGLPLTENDAI---FTLDNTRLTILNANRDHED---IYTCVANNTAGQ 1903
Query: 538 IT 543
++
Sbjct: 1904 VS 1905
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 319 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDY 498
I G+ L+C + + IVW K+ P+ E +++ G ++ G N D
Sbjct: 899 IEGQDLTLSCVVVLGTPKPSIVWIKDDKPVEE----GPTIKIEGGGSLLRLRG-GNPKDE 953
Query: 499 GXYTCGLKNQTGHIT 543
G YTC + G+ T
Sbjct: 954 GKYTCIAVSPAGNST 968
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 331 PFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYT 510
P +NC ++ ++ W + PL + YEL N G T +I RS + G YT
Sbjct: 2685 PVEINCVVSGSPHP-KVYWLFDDKPLEPDSAA---YELTNNGETLKIV-RSQVEHAGTYT 2739
Query: 511 CGLKNQTG 534
C +N G
Sbjct: 2740 CEAQNNVG 2747
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 358 VPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
V L F+I W K +PL E + + L N LT R +ED YTC N G
Sbjct: 1850 VSLGDFQITWMKQGLPLTENDAI---FTLDNTRLTILNANRDHED---IYTCVANNTAGQ 1903
Query: 538 IT 543
++
Sbjct: 1904 VS 1905
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 319 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDY 498
I G+ L+C + + IVW K+ P+ E +++ G ++ G N D
Sbjct: 899 IEGQDLTLSCVVVLGTPKPSIVWIKDDKPVEE----GPTIKIEGGGSLLRLRG-GNPKDE 953
Query: 499 GXYTCGLKNQTGHIT 543
G YTC + G+ T
Sbjct: 954 GKYTCIAVSPAGNST 968
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 331 PFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYT 510
P +NC ++ ++ W + PL + YEL N G T +I RS + G YT
Sbjct: 2685 PVEINCVVSGSPHP-KVYWLFDDKPLEPDSAA---YELTNNGETLKIV-RSQVEHAGTYT 2739
Query: 511 CGLKNQTG 534
C +N G
Sbjct: 2740 CEAQNNVG 2747
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +1
Query: 358 VPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
V L F+I W K +PL E + + L N LT R +ED YTC N G
Sbjct: 1850 VSLGDFQITWMKQGLPLTENDAI---FTLDNTRLTILNANRDHED---IYTCVANNTAGQ 1903
Query: 538 IT 543
++
Sbjct: 1904 VS 1905
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 319 IVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDY 498
I G+ L+C + + IVW K+ P+ E +++ G ++ G N D
Sbjct: 899 IEGQDLTLSCVVVLGTPKPSIVWIKDDKPVEE----GPTIKIEGGGSLLRLRG-GNPKDE 953
Query: 499 GXYTCGLKNQTGHIT 543
G YTC + G+ T
Sbjct: 954 GKYTCIAVSPAGNST 968
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 331 PFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERYELQNXGLTFQIXGRSNEDDYGXYT 510
P +NC ++ ++ W + PL + YEL N G T +I RS + G YT
Sbjct: 2685 PVEINCVVSGSPHP-KVYWLFDDKPLEPDSAA---YELTNNGETLKIV-RSQVEHAGTYT 2739
Query: 511 CGLKNQTG 534
C +N G
Sbjct: 2740 CEAQNNVG 2747
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +1
Query: 262 IAPVTQPTQ-ELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLXERY 438
IA V + +Q E + E +GR L+C + ++ W NS+P+ ++ +
Sbjct: 123 IAYVDEISQNEKIKLEPNVPTLGRSLVLHCPIPKAYPPPKVTWTVNSLPISHISS--DYV 180
Query: 439 ELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGH 537
N L I + +G + C + N GH
Sbjct: 181 AFPNGTL---IISHFSYHHFGYFECNINNFAGH 210
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 28.7 bits (61), Expect = 5.9
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +1
Query: 232 VLTSAHNSSTIAPVTQ-PTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSV-P 405
+L + SS ++ V+ T+ L+N E R FN +C+L LD F ++ + + P
Sbjct: 125 ILYFSRKSSLLSEVSSISTKNLLN-ETKSIAKDRLFNSSCSLLTGLDEFVALFDDDQLTP 183
Query: 406 LGE-VAGLXERYELQNXGLTFQIXGRSNEDDYGXYTCGLKNQTGHITAWMVTGNV 567
E +A + + Q +T I G D+ KN + W V ++
Sbjct: 184 NSEKIAQIINEFHRQASLMTECISGLKKLDEDIDALSNWKNVEAYNKLWYVKDSI 238
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 226 CGVLTSAHNSSTIAPVTQPTQELVNYEALKYI--VGRPFNLNCTLAVPLDSFEIVWKKNS 399
CG T +H +TI V + + V Y K G+ ++ TL P+D ++VW K+
Sbjct: 13948 CG--TESH--TTILKVEELPVDFVKYLPRKTSGKEGQEVTISVTLNHPIDISKVVWLKDG 14003
Query: 400 VPLGEVAGLXERYELQNXGLTFQI-XGRSNEDDYGXY 507
PL + + Y + G + + R+ +D G Y
Sbjct: 14004 KPL----EINKDYSIDTVGCSVSLTLRRAKYEDSGKY 14036
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 5.9
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 226 CGVLTSAHNSSTIAPVTQPTQELVNYEALKYI--VGRPFNLNCTLAVPLDSFEIVWKKNS 399
CG T +H +TI V + + V Y K G+ ++ TL P+D ++VW K+
Sbjct: 13948 CG--TESH--TTILKVEELPVDFVKYLPRKTSGKEGQEVTISVTLNHPIDISKVVWLKDG 14003
Query: 400 VPLGEVAGLXERYELQNXGLTFQI-XGRSNEDDYGXY 507
PL + + Y + G + + R+ +D G Y
Sbjct: 14004 KPL----EINKDYSIDTVGCSVSLTLRRAKYEDSGKY 14036
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,457
Number of Sequences: 27780
Number of extensions: 268535
Number of successful extensions: 710
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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