Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M16
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.38
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.50
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.2
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.2
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 26 5.6
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 26 5.8
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 6.2
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = +3
Query: 591 GXKKXFPXGAPXXPXNXXXKPQXXXXLSTXPPXXRGXQPQKHPPXQXXAPXHP--XPXKX 764
G ++ P G+P P P S PP G P PP P P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPP 283
Query: 765 XXQRSPXPPHXXXKPPTXXKKXXXXSXXXPP 857
SP PP PP + + PP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPXP 786
G PPP P P P P P T P P +P P P P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P PP + A + G PP P T P S P P A +P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSP 289
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQP 816
P PP P P G P P + P
Sbjct: 290 --PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = +3
Query: 591 GXKKXFPXGAPXXPXNXXXKPQXXXXLSTXPPXXRGXQPQKHPPXQXXAPXHP--XPXKX 764
G ++ P G+P P P S PP G P PP P P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPP 304
Query: 765 XXQRSPXPPHXXXKPPTXXKKXXXXSXXXPP 857
SP PP PP + + PP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPXP 786
G PPP P P P P P T P P +P P P P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P PP + A + G PP P T P S P P A +P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSP 310
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQP 816
P PP P P G P P + P
Sbjct: 311 --PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = +3
Query: 591 GXKKXFPXGAPXXPXNXXXKPQXXXXLSTXPPXXRGXQPQKHPPXQXXAPXHP--XPXKX 764
G ++ P G+P P P S PP G P PP P P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP---PPRTGSPPPPPTGSPPPP 289
Query: 765 XXQRSPXPPHXXXKPPTXXKKXXXXSXXXPP 857
SP PP PP + + PP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPXP 786
G PPP P P P P P T P P +P P P P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/96 (25%), Positives = 28/96 (29%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P PP + A + G PP P T P S P P A +P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP---AGGSP 295
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQP 816
P PP P P G P P + P
Sbjct: 296 --PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.29
Identities = 29/97 (29%), Positives = 29/97 (29%)
Frame = -2
Query: 790 GGXGDLWXXXFXGXGWXGAXXCXGGCFWGCXPRFXGGXVDRXXXCWGXXXXFXGXXGAPX 611
GG G G G G C GGC P GG C G G G
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGG------CGGGGGGCGGGGGGCG 80
Query: 610 GKXFFXPXXXPVGXRXXXXLXGGGGGGGXXXKXPPPP 500
G G GGGG GG PPPP
Sbjct: 81 GGGGCGGGGGGCGG-GGGGCGGGGGCGGGCAPPPPPP 116
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/102 (29%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Frame = -2
Query: 790 GGXGDLWXXXFXGXGWXGAXXCXGGCFWGC-----XPRFXGGXVDRXXXCWGXXXXFXGX 626
GG G G G G GGC GC P GG C G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 625 XGAPXGKXFFXPXXXPVGXRXXXXLXGGGGGGGXXXKXPPPP 500
G G G GGGGG G PPPP
Sbjct: 83 GGCGGGGG---------GCGGGGGGCGGGGGCGGGCAPPPPP 115
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -2
Query: 748 GWXGAXXCXGGCFWGCXPRFXGGXVDRXXXCWGXXXXFXGXXGAPXGKXFFXPXXXPVGX 569
G G C GGC GC GG C G G G G P P G
Sbjct: 27 GGGGGGGCGGGCGGGCGG--GGGCAPPPAPCGGGCGGGGGGCGGGGG---CAPPPAPCGG 81
Query: 568 RXXXXLXGGGGGGG 527
G GGGGG
Sbjct: 82 GCGGGGGGCGGGGG 95
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Frame = -2
Query: 811 GGLXXXWGGXGDLWXXXFXGXGWXGAXXCXGGCFWGCXPRFXGG-XVDRXXXCWGXXXXF 635
GG GG G G G + C GG GC GG C G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 634 XGXXGAPXGKXFFXPXXXPVGXRXXXXLXGGGGGGG 527
G AP G G GGGG GG
Sbjct: 179 GGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -2
Query: 748 GWXGAXXCXGGCFWGCXPRFXGGXVDRXXXCWGXXXXFXGXXGAPXGKXFFXPXXXPVGX 569
G G C GGC GC GG C G G G G P P G
Sbjct: 27 GGGGGGGCGGGCGGGCGG--GGGCAPPPAPCGGGCGGGGGGCGGGGG---CAPPPAPCGG 81
Query: 568 RXXXXLXGGGGGGG 527
G GGGGG
Sbjct: 82 GCGGGGGGCGGGGG 95
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Frame = -2
Query: 811 GGLXXXWGGXGDLWXXXFXGXGWXGAXXCXGGCFWGCXPRFXGG-XVDRXXXCWGXXXXF 635
GG GG G G G + C GG GC GG C G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 634 XGXXGAPXGKXFFXPXXXPVGXRXXXXLXGGGGGGG 527
G AP G G GGGG GG
Sbjct: 179 GGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGG 214
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 607 SPGGPP-PXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPX 783
SP GPP P P +P S P P + + +P P PP P P GP
Sbjct: 205 SPSGPPSPGPVDPSEDPKP--SEPPSP-GPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPP 261
Query: 784 PXPT 795
PT
Sbjct: 262 GPPT 265
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 610 PGGPPPXPXTXXXNPNXXXSYPQXPHXXA-XHNPKNTPXXXPXPPXTPXP 756
P G PP P P + P PH H P P P P P P
Sbjct: 66 PSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRP 115
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 601 FFXPXXXPVGXRXXXXLXGGGGGGGXXXKXPPPP 500
FF P P GGGGGGG PPPP
Sbjct: 18 FFFPRVTP-NDGCGCGCGGGGGGGGCCAPPPPPP 50
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 547 GGGGGGGXXXKXPPPP 500
GGGGGGG PPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/88 (23%), Positives = 23/88 (26%), Gaps = 4/88 (4%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPX----PXTXXXNPNXXXSYPQXPHXXA 696
P PP K G + P PPP P S P P
Sbjct: 445 PSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPP 504
Query: 697 XHNPKNTPXXXPXPPXTPXPXXXXXKGP 780
P + P P PP P GP
Sbjct: 505 IATPSSVPPPPPPPPPPPPALEQEISGP 532
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/99 (22%), Positives = 24/99 (24%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P P K +P K P P P P P P
Sbjct: 169 PKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP-KPEPKPKPKPEPKPKPKPKP 227
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQPXKK 825
K P P P P P P P P +P K
Sbjct: 228 KPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPK 266
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/99 (22%), Positives = 25/99 (25%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P P K +P K P P P NP P P
Sbjct: 161 PNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKP---NPKPEPKPKPKPEPKPKPKP 217
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQPXKK 825
+ P P P P P P P P +P K
Sbjct: 218 EPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPK 256
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/99 (23%), Positives = 26/99 (26%)
Frame = +1
Query: 529 PXXPPPXKXXXRPGXXQAXXXAXKXXSPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNP 708
P P K +P K S P P P P P P
Sbjct: 235 PNPKPEPKPKPKPKPKPEPKPKTKLKSE--PKPKPKLKP-KPKPNPKPEPNPMPELKPKP 291
Query: 709 KNTPXXXPXPPXTPXPXXXXXKGPXPXPTXXXNXQPXKK 825
K+ P P P P P P P P +P K
Sbjct: 292 KHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKPELKPNHK 330
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 619 PPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXP 756
PPP P + PQ P+ P+N P P PP P P
Sbjct: 575 PPPPPSSGTRGIAPSRPLPQAPNYG---TPENRPHAVPPPPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 619 PPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXP 756
PPP P + PQ P+ P+N P P PP P P
Sbjct: 401 PPPPPSSGTRGIAPSRPLPQAPNYG---TPENRPHAVPPPPPPPPP 443
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 26.2 bits (55), Expect(2) = 5.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -2
Query: 685 GGXVDRXXXCWGXXXXFXGXXGAPXGKXFFXPXXXPVGXRXXXXLXGGGGGG 530
GG +G G GA +F PVG GGGGGG
Sbjct: 292 GGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGG 343
Score = 21.0 bits (42), Expect(2) = 5.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 547 GGGGGGG 527
GGGGGGG
Sbjct: 358 GGGGGGG 364
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 26.2 bits (55), Expect(2) = 5.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -2
Query: 685 GGXVDRXXXCWGXXXXFXGXXGAPXGKXFFXPXXXPVGXRXXXXLXGGGGGG 530
GG +G G GA +F PVG GGGGGG
Sbjct: 186 GGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGG 237
Score = 21.0 bits (42), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 547 GGGGGGG 527
GGGGGGG
Sbjct: 250 GGGGGGG 256
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = +3
Query: 573 PTGXXXGXKKXFPXGAPXXPXNXXXKPQXXXXLSTXPPXXRGXQPQKHPPXQXXAPXHPX 752
P G K GAP P PQ +T PP Q PP Q P
Sbjct: 97 PQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNG 156
Query: 753 PXKXXXQRSP 782
P + P
Sbjct: 157 PPGEQGPKGP 166
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +1
Query: 607 SPGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPXP 786
+P PPP P + P+ + P P A P P PP TP P + P P
Sbjct: 87 APLPPPPPPASPCCGPSPVPA-PCCPPPPAPA----APCCPPPPPPTPSPLVCCKQAPVP 141
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 506 PPXXXXFGXLGXXXXXPPPPPGXXXXEKXXXXXPP 402
PP FG G PPPPPG PP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXP----HXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGP 780
GGPPP P P P P + P P PP P P KG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 781 XPXP 792
P P
Sbjct: 784 PPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXP----HXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGP 780
GGPPP P P P P + P P PP P P KG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 781 XPXP 792
P P
Sbjct: 784 PPPP 787
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 506 PPXXXXFGXLGXXXXXPPPPPGXXXXEKXXXXXPP 402
PP FG G PPPPPG PP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +1
Query: 613 GGPPPXPXTXXXNPNXXXSYPQXP----HXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGP 780
GGPPP P P P P + P P PP P P KG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 781 XPXP 792
P P
Sbjct: 367 PPPP 370
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 553 LXGGGGGGGXXXKXPPPPXXXFLVFWGXXXXXPPP 449
L GGGGG PPPP G PPP
Sbjct: 18 LFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPP 52
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 610 PGGPPPXPXTXXXNPNXXXSYPQXPHXXAXHNPKNTPXXXPXPPXTPXPXXXXXKGPXP 786
P P P P P+ P P A P P P P TP P P P
Sbjct: 132 PAFPTPPPSVGSAAPSIQ---PPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRP 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.146 0.494
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,905,779
Number of Sequences: 27780
Number of extensions: 220722
Number of successful extensions: 1380
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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