Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M15
         (1111 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   1.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   2.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   6.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   6.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.5  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 732 PXPPPPPXXGG 764
           P PPPPP  GG
Sbjct: 374 PLPPPPPIRGG 384



 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1027 PLPPPPP 1047
            PLPPPPP
Sbjct: 374  PLPPPPP 380



 Score = 22.2 bits (45), Expect = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 739 PPPPPXXGG 765
           PPPPP  GG
Sbjct: 376 PPPPPIRGG 384


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 728 KPXPPPPPXXXGG 766
           KP PPPPP    G
Sbjct: 340 KPAPPPPPPSSSG 352



 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 481 GGXPPPPXXXXPPPPP 528
           G    PP    PPPPP
Sbjct: 333 GDSDTPPKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 1082 PXPRPXPPPP 1111
            P P P PPPP
Sbjct: 339  PKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 739 PPPPPXXGGGP 771
           PPPPP    GP
Sbjct: 343 PPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 802 GGAXPPPXGXPXPPPXXGGG 743
           G +  PP   P PPP    G
Sbjct: 333 GDSDTPPKPAPPPPPPSSSG 352


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +1

Query: 1027 PLPPPPPXXXPXXPXXPXPXPPAXXPXP 1110
            P P P P   P  P    P  P+  P P
Sbjct: 21   PGPQPSPHQSPQAPQRGSPPNPSQGPPP 48



 Score = 23.4 bits (48), Expect = 3.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 937 PXXPPRGPPPXAPXXXXP 990
           P  P +GPPP  P    P
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56



 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 934 PPXXPPRGPPPXAPXXXXP 990
           P   PP G PP AP    P
Sbjct: 42  PSQGPPPGGPPGAPPSQNP 60



 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 802 GGAXPPPXGXPXPP 761
           GG  PP  G P PP
Sbjct: 406 GGQLPPSAGAPMPP 419


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 1024 PPLPPPPP 1047
            PP PPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 22.2 bits (45), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 728  KPXPPPPPXXXG 763
            +P PPPPP   G
Sbjct: 1354 QPPPPPPPPSSG 1365


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
            variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 1024 PPLPPPPPXXXPXXPXXPXP 1083
            PPLPP      P  P  P P
Sbjct: 638  PPLPPKRIRKMPSMPLLPRP 657


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 1107 GGGXGRGXGXGGGXXXG 1057
            G G GRG G GG    G
Sbjct: 79   GRGKGRGHGKGGSRGRG 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,943
Number of Sequences: 438
Number of extensions: 14548
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 37355310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)