Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M14
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   1.9  
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058     29   3.4  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 237 GRAIFGRSWASXCTXPTKPPFP 172
           GR +FG S AS C   + PPFP
Sbjct: 130 GRLVFGSSGASACCDRSAPPFP 151


>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
          Length = 339

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -1

Query: 276 KFSRVFFXLGXNRGRAIFGRSWASXCTXPTKPP-FPLGSHFP 154
           +F+  FF  G     +   R  +S C+ P  PP FP+  H+P
Sbjct: 140 EFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQHYP 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,906,520
Number of Sequences: 37544
Number of extensions: 180056
Number of successful extensions: 250
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)