Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M13
         (861 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    55   2e-06
UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like ...    36   1.3  
UniRef50_Q9VGU5 Cluster: CG6621-PA; n=2; Drosophila melanogaster...    36   1.7  
UniRef50_A6GGW9 Cluster: Pkn9 associate protein 1; n=1; Plesiocy...    29   2.8  
UniRef50_Q3WB33 Cluster: Putative uncharacterized protein precur...    34   5.3  
UniRef50_A6QXJ9 Cluster: Predicted protein; n=13; Ajellomyces ca...    33   9.3  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
 Frame = +2

Query: 110 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKEFHKTLEQQ 244
           MAAKFVV L AC+AL+  AMVRRDAP   + F+++E H KEF KT  +Q
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQ 49



 Score = 38.7 bits (86), Expect = 0.19
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +3

Query: 246 FNSLTKSKDAQDFSKAWKDGSESV 317
           FNSL  SK+ QDF+KA KDGS+SV
Sbjct: 50  FNSLVNSKNTQDFNKALKDGSDSV 73


>UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like 1
           (S. cerevisiae); n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to FIP1 like 1 (S. cerevisiae) -
           Strongylocentrotus purpuratus
          Length = 841

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = +3

Query: 612 GXPPPKLFXPTTNXGGXXSNXPXXGXPQPPXLXNXTXXXXXPPKXKXPRXGGPP 773
           G PPP +  P  N GG  SN P      PP           PP+   P   GPP
Sbjct: 420 GLPPPHMTGPPPNMGGPPSNLPPPNFSGPP--RPMFGDGNYPPQSGGPPMSGPP 471


>UniRef50_Q9VGU5 Cluster: CG6621-PA; n=2; Drosophila
           melanogaster|Rep: CG6621-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 872

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +1

Query: 112 GRQVRSSLRLHRSGPRSDGATR-RSRLLQGHRTPHQGVP*DF-RTTXLTRSPSQRTHRTS 285
           GR  RSSLR  RSG RS   +R RSR  + +       P  +     + R  ++RT R+ 
Sbjct: 703 GRSTRSSLRSRRSGSRSRSISRSRSRRRRTYSRSRSPSPRSYGNRFVIGRYRNRRTRRSR 762

Query: 286 ARLGRTAPSPCL 321
           +   R +PSP L
Sbjct: 763 SFHRRRSPSPIL 774


>UniRef50_A6GGW9 Cluster: Pkn9 associate protein 1; n=1;
           Plesiocystis pacifica SIR-1|Rep: Pkn9 associate protein
           1 - Plesiocystis pacifica SIR-1
          Length = 237

 Score = 29.5 bits (63), Expect(2) = 2.8
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +3

Query: 612 GXPPPKLFXPTTNXGGXXSNXPXXGXPQPPXLXNXTXXXXXPPKXKXPRXGGP 770
           G PPP +  P+   GG        G P  P   N       PP    P  GGP
Sbjct: 181 GGPPPNMRGPSGPPGGPPGMRGPGGPPGGPP-PNMRGPGGPPPVGGPPSMGGP 232



 Score = 24.2 bits (50), Expect(2) = 2.8
 Identities = 12/40 (30%), Positives = 14/40 (35%)
 Frame = +3

Query: 381 PPXXQRAXGXXFWXPSXXGXKNXXXPPXGPPXEXXPXGAP 500
           PP  +   G         G +    PP GPP    P G P
Sbjct: 128 PPGVRGPGGPPGPPGGPPGIRGPGGPPGGPPGIRGPGGPP 167


>UniRef50_Q3WB33 Cluster: Putative uncharacterized protein
           precursor; n=1; Frankia sp. EAN1pec|Rep: Putative
           uncharacterized protein precursor - Frankia sp. EAN1pec
          Length = 271

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +1

Query: 58  VCSPVRISSALSLSTAHHGRQVRSSLRLHRSGP-RSDGATRRSRLLQGHRTPHQGVP 225
           + S   +S+ ++ +T    R  R  L   RS P R DGATRR R  Q HR+ H G P
Sbjct: 172 LASTAGMSADMARNTGGRPRAGRGHLVHVRSAPNRGDGATRRPRRPQAHRS-HGGQP 227


>UniRef50_A6QXJ9 Cluster: Predicted protein; n=13; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 470

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 79  SSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQ 216
           SS +  S  HHGR    S+R++R  P+      R    QGHR  H+
Sbjct: 213 SSKIKRSWRHHGRAPPESVRVNRDTPQWTRQGHRQGHRQGHRQGHR 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,830,544
Number of Sequences: 1657284
Number of extensions: 9075483
Number of successful extensions: 24647
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24434
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)