Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M12
(917 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.63
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.63
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.63
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.63
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.63
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.63
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.63
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 24 1.4
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 24 1.4
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 5.8
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 5.8
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 7.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 160 MKRVHLGQSTVNANGETKRQRTSYTRYQT 188
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 245 MDKSRLRQSTVHSNEIGERQRSQRTGYES 331
M + L QSTV++N +RQR+ T Y++
Sbjct: 204 MKRVHLGQSTVNANGETKRQRTSYTRYQT 232
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 201 FPTESKYRHHRTAYEIVLIRNTNVARLSNYQKRANCR-FQAHSCL 70
+ TES Y+ + + N + +NYQ+ +C+ +Q +C+
Sbjct: 198 YDTESSYQFNDPQFNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 242
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 201 FPTESKYRHHRTAYEIVLIRNTNVARLSNYQKRANCR-FQAHSCL 70
+ TES Y+ + + N + +NYQ+ +C+ +Q +C+
Sbjct: 218 YDTESSYQFNDPQFNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 262
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 236 SDCMDKSRLRQSTVHSNEIGERQRSQRTGYES 331
SDC Q+ H+NE+ R + + YES
Sbjct: 27 SDCDKNQNTEQNYTHNNEMYHRVKEEPI-YES 57
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 236 SDCMDKSRLRQSTVHSNEIGERQRSQRTGYES 331
SDC Q+ H+NE+ R + + YES
Sbjct: 27 SDCDKNQNTEQNYTHNNEMYHRVKEEPI-YES 57
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 21.8 bits (44), Expect = 7.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -2
Query: 421 LVLPAGPRTALHTAGGGTPSRTLARTSSPGALISGALTSL 302
LV G T T+G S + T+ A ISG L SL
Sbjct: 99 LVQEPGSSTTSATSGAVMASPPMPITTDNVAAISGVLRSL 138
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,278
Number of Sequences: 336
Number of extensions: 3709
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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