Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M11
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 45 6e-05
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 45 6e-05
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 45 6e-05
AB081597-1|BAC19844.1| 39|Caenorhabditis elegans cyclic AMP-re... 30 1.9
Z68216-5|CAA92464.1| 428|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 29 3.4
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 29 3.4
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 29 3.4
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z80214-3|CAB02265.1| 249|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 28 7.8
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 7.8
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 7.8
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 7.8
AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 28 7.8
AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 28 7.8
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 7.8
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 7.8
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 7.8
AB081598-1|BAC19845.1| 56|Caenorhabditis elegans cyclic AMP-re... 28 7.8
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 246 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 276
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 10 GGDSEDEARRRREQLNRRPSYRMILKDL 37
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 271 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 301
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 35 GGDSEDEARRRREQLNRRPSYRMILKDL 62
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 254 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 284
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 480 NTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDL 599
+ Q QS E S DE+ +R RE L RRPSYR IL DL
Sbjct: 8 SAQQQSALQEGGDSEDEARRR--REQLNRRPSYRMILKDL 45
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 267 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 297
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDL 56
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 265 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 295
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDL 56
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 265 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 295
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 29 GGDSEDEARRRREQLNRRPSYRMILKDL 56
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 766 RKRELXLMKNRXTAXECRXKKKEYXXCPENQ 858
RKR++ L+KNR A ECR KKKEY C EN+
Sbjct: 246 RKRQVRLLKNREAAKECRRKKKEYVKCLENR 276
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYRKILNDL 599
G E R+ RE L RRPSYR IL DL
Sbjct: 10 GGDSEDEARRRREQLNRRPSYRMILKDL 37
>AB081597-1|BAC19844.1| 39|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 alpha protein.
Length = 39
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 480 NTQGQSCSDESCGSGDESPKRKYREMLTRRPSYR 581
+ Q QS E S DE+ +R RE L RRPSYR
Sbjct: 8 SAQQQSALQEGGDSEDEARRR--REQLNRRPSYR 39
>Z68216-5|CAA92464.1| 428|Caenorhabditis elegans Hypothetical
protein F27C8.6 protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 393 LVSKPSSVIHTTQGTLQTLQIKPEPNTLVNTQGQSCSDESCGSGDESPKRKYR 551
+ +KPS+++ T+G L TL LVNT GQ D +E+P + YR
Sbjct: 65 MFTKPSNMVQWTRGALNTL--SKTLGLLVNTHGQ--VDIKWHKWNETPVKVYR 113
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 282 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 428
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 282 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 428
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 282 SQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTT 428
+Q AQ+Q IQ QQ QT + V P+ +KP+ V +TT
Sbjct: 722 AQKIQAQIQQQIQQQQQRQAQTTPQV--VATPRKKTTPATKPAIVFYTT 768
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical protein
T23B5.3a protein.
Length = 816
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 279 PSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIK 458
P P++++ ++ Q+ I+ I S +I + +S+ S+ + +G++ L +
Sbjct: 671 PISRPASRLMQRLE--QKGTIRRDDEIISQEIRRVAETNLSRSPSLA-SLRGSMSNLAFR 727
Query: 459 PEPNTLVNTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRK-ILNDLGRSRNCSHSSWN 635
L T G+ + + + SP R+ + + + +L LGR R H+ N
Sbjct: 728 ASQLNLAGTSGELPPNLTKFASVNSPARQSLSSMKKTTDRQAAVLERLGRLRESLHAGKN 787
Query: 636 YT 641
YT
Sbjct: 788 YT 789
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical protein
T23B5.3a protein.
Length = 816
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 279 PSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIK 458
P P++++ ++ Q+ I+ I S +I + +S+ S+ + +G++ L +
Sbjct: 671 PISRPASRLMQRLE--QKGTIRRDDEIISQEIRRVAETNLSRSPSLA-SLRGSMSNLAFR 727
Query: 459 PEPNTLVNTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRK-ILNDLGRSRNCSHSSWN 635
L T G+ + + + SP R+ + + + +L LGR R H+ N
Sbjct: 728 ASQLNLAGTSGELPPNLTKFASVNSPARQSLSSMKKTTDRQAAVLERLGRLRESLHAGKN 787
Query: 636 YT 641
YT
Sbjct: 788 YT 789
>Z80214-3|CAB02265.1| 249|Caenorhabditis elegans Hypothetical
protein T23B5.3c protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 279 PSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIK 458
P P++++ ++ Q+ I+ I S +I + +S+ S+ + +G++ L +
Sbjct: 104 PISRPASRLMQRLE--QKGTIRRDDEIISQEIRRVAETNLSRSPSLA-SLRGSMSNLAFR 160
Query: 459 PEPNTLVNTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRK-ILNDLGRSRNCSHSSWN 635
L T G+ + + + SP R+ + + + +L LGR R H+ N
Sbjct: 161 ASQLNLAGTSGELPPNLTKFASVNSPARQSLSSMKKTTDRQAAVLERLGRLRESLHAGKN 220
Query: 636 YT 641
YT
Sbjct: 221 YT 222
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 294 SAQVQSVIQPNQQSVIQTASNIQ-SVQIPKGNVILV-SKPSSV-IHTTQGTLQTLQIKPE 464
+ ++++ + N S+ NI+ Q G +I + SK ++ IH Q L+ L +KPE
Sbjct: 294 NTRIKAYKRANVFSIEHVLRNIKHEQQTETGKMIAIPSKINNTWIHWPQKNLKKLAVKPE 353
Query: 465 PNTLVNTQGQSCSDESCGSGDESPK 539
N++ + + D +E PK
Sbjct: 354 FNSITHLKHIELLDGLKSKNEEEPK 378
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 254 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 305
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 258 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 309
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 253 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 304
>AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform b protein.
Length = 526
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 160 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 211
>AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform a protein.
Length = 577
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 211 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 262
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 293 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 344
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 375 PKGNVILVSKPSSVIHTTQGTLQTLQ----IKPEPNTLVNTQGQSCSDESCG 518
P V VS+PS+ + G Q + I P+TL TQ +C + +CG
Sbjct: 367 PSAKVSTVSEPSTSSGPSGGFNQNVSSPAGIPRVPSTLRTTQASTCMNSACG 418
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 324 NQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEP 467
+Q S+I T I+S I ++ SKP + Q T++ PEP
Sbjct: 692 HQNSMIPTNPCIESAMIEYSRIMGYSKPGLATNRVQSTVEEAVDPPEP 739
>AB081598-1|BAC19845.1| 56|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 1 protein.
Length = 56
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 516 GSGDESPKRKYREMLTRRPSYR 581
G E R+ RE L RRPSYR
Sbjct: 35 GGDSEDEARRRREQLNRRPSYR 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,477,381
Number of Sequences: 27780
Number of extensions: 340359
Number of successful extensions: 916
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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