Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M10
         (916 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   2.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   8.9  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   8.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.9  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 12  LRTHYREFLKISTTLIFSPVITRDHIKMKFFMIFVL 119
           LRTH R  L ++ +++   + + D   +K+ + F+L
Sbjct: 129 LRTHLRGTLTVNVSVLLLSLASPDESSLKYEVEFLL 164


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 216 WAKNGFGVIDHN*VSVFHYLNRVLERW 136
           +A  G GV +       H LN  +ERW
Sbjct: 102 FANRGLGVFERTEPLSPHLLNLEVERW 128


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 199 ESILCPAYCRKRLRT 243
           +SI+C  +C++R  T
Sbjct: 74  KSIICKCFCKRRTNT 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 199 ESILCPAYCRKRLRT 243
           +SI+C  +C++R  T
Sbjct: 522 KSIICKCFCKRRTNT 536


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 5/23 (21%)
 Frame = +3

Query: 339 DPPQGR-----PYFKPTPFPGCS 392
           D  QGR     P +KP   PGCS
Sbjct: 874 DSAQGRAILKIPSYKPASTPGCS 896


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,068
Number of Sequences: 438
Number of extensions: 5031
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)