Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M09
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 91 1e-18
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 87 2e-17
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 86 4e-17
06_03_0560 + 22174655-22174720,22175208-22175615,22176540-22177787 31 0.92
11_01_0268 - 2029007-2029464,2029521-2029615,2030815-2031077,203... 28 8.6
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 91.1 bits (216), Expect = 1e-18
Identities = 80/212 (37%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Frame = +2
Query: 104 STWARGP*EAFESA*RSPSMGCWTKLGRCVCTRDRQPGPHKVCASACPLVIFLRNRLKYA 283
S WARG + + +PS KLG + GPHK PL++ LRNRLKYA
Sbjct: 15 SFWARGLKKHLKRL-NAPSHWMLDKLGGAFAPKPSS-GPHKA-RECLPLILILRNRLKYA 71
Query: 284 LTGKRSPEKL*TNAS*RLMGKVRTDPTYPAGFMDVVSIEKTNDCFV*SMMLRADSQSHRI 463
LT R + + GKVRTD TYPAGFMDVVSI KT + F + + H I
Sbjct: 72 LT-YREVISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSI 130
Query: 464 TPEEAKYKL--V*SXXCGDPDLRMFRT-W*RMMAAPSATXTXLSKSTIPSS*TSQLXXLW 634
E+AK+KL V S G + T R + P L K+ + +
Sbjct: 131 KDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPD----PLIKANDTIKIDLETNKIV 186
Query: 635 XFIKFESGXLVYDHGXAVTWGRVGTIVSRXKH 730
FIKF+ G +V G T GRVG I SR KH
Sbjct: 187 DFIKFDVGNIVMVTGGRNT-GRVGVIKSREKH 217
Score = 85.4 bits (202), Expect = 5e-17
Identities = 76/215 (35%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Frame = +1
Query: 82 FFLDLILVNMG---ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPG 252
FF+ ++++ AR L+ KRL P H MLDK P+PS+G P RECLP
Sbjct: 4 FFVKYVILDQRSFWARGLKKHLKRLNAPSHWMLDKLGGA-FAPKPSSG-PHKARECLPLI 61
Query: 253 DFPEESSEVCFD-RETKS*KIVNQRLIKVDGE-S*D*PYLSCW--IYGCCLN*ED**LFR 420
+ RE S I+ QR + VDG+ D Y + + + E+ FR
Sbjct: 62 LILRNRLKYALTYREVIS--ILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGEN---FR 116
Query: 421 LIYDVKGRFTIPPYHP*XXXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXS 600
L+YD KGRF + K + G K +P+L T+DGRTIRYP PLIK N +
Sbjct: 117 LLYDTKGRFRLHSIKD-EDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDT 175
Query: 601 XQLDLATTXIMXLHQV*VWGXCV*SRGXRNLGPCG 705
++DL T I+ + V G V G RN G G
Sbjct: 176 IKIDLETNKIVDFIKFDV-GNIVMVTGGRNTGRVG 209
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 86.6 bits (205), Expect = 2e-17
Identities = 74/199 (37%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFD-R 291
AR L+ KRL PKH MLDK P+PS+G P RECLP + R
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGA-FAPKPSSG-PHKSRECLPLILIIRNRLKYALTYR 59
Query: 292 ETKS*KIVNQRLIKVDGE-S*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP 468
E S I+ QR + VDG+ D Y + ++ + + +RL+YD KGRF +
Sbjct: 60 EVIS--ILMQRHVLVDGKVRTDKTYPAGFMDVISIP-KTGENYRLLYDTKGRFRLQSVKD 116
Query: 469 *XXXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV 648
K + G K +PYL T+DGRTIRYP PLIK N + ++DL T I+ +
Sbjct: 117 -EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKF 175
Query: 649 *VWGXCV*SRGXRNLGPCG 705
V G V G RN G G
Sbjct: 176 DV-GNVVMVTGGRNTGRVG 193
Score = 79.8 bits (188), Expect = 3e-15
Identities = 64/175 (36%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Frame = +2
Query: 215 GPHKVCASACPLVIFLRNRLKYALTGKRSPEKL*TNAS*RLMGKVRTDPTYPAGFMDVVS 394
GPHK PL++ +RNRLKYALT R + + GKVRTD TYPAGFMDV+S
Sbjct: 34 GPHK-SRECLPLILIIRNRLKYALT-YREVISILMQRHVLVDGKVRTDKTYPAGFMDVIS 91
Query: 395 IEKTNDCFV*SMMLRADSQSHRITPEEAKYKL--V*SXXCGDPDLRMFRTW-*RMMAAPS 565
I KT + + + + + E+AK+KL V S G + T+ R + P
Sbjct: 92 IPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPD 151
Query: 566 ATXTXLSKSTIPSS*TSQLXXLWXFIKFESGXLVYDHGXAVTWGRVGTIVSRXKH 730
L K+ + + FIKF+ G +V G T GRVG I +R KH
Sbjct: 152 ----PLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNT-GRVGVIKNREKH 201
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 120 GPKKHLKALNAPQAWDVGQNLGGVYAPE 203
G KKHLK LNAP+ W + LGG +AP+
Sbjct: 4 GLKKHLKRLNAPKHWML-DKLGGAFAPK 30
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 85.8 bits (203), Expect = 4e-17
Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFD-R 291
AR L+ KRL PKH MLDK P+PS+G P RECLP + R
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGA-FAPKPSSG-PHKSRECLPLILIIRNRLKYALTYR 59
Query: 292 ETKS*KIVNQRLIKVDGE-S*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP 468
E S I+ QR + VDG+ D Y + ++ + + +RL+YD KGRF +
Sbjct: 60 EVIS--ILMQRHVLVDGKVRTDKTYPAGFMDVISIP-KTGENYRLLYDTKGRFRLQSVKD 116
Query: 469 *XXXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV 648
K + G K +PYL T+DGRTIRYP P+IK N + ++DL T I+ +
Sbjct: 117 -EDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKF 175
Query: 649 *VWGXCV*SRGXRNLGPCG 705
V G V G RN G G
Sbjct: 176 DV-GNVVMVTGGRNTGRVG 193
Score = 79.0 bits (186), Expect = 5e-15
Identities = 63/175 (36%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Frame = +2
Query: 215 GPHKVCASACPLVIFLRNRLKYALTGKRSPEKL*TNAS*RLMGKVRTDPTYPAGFMDVVS 394
GPHK PL++ +RNRLKYALT R + + GKVRTD TYPAGFMDV+S
Sbjct: 34 GPHK-SRECLPLILIIRNRLKYALT-YREVISILMQRHVLVDGKVRTDKTYPAGFMDVIS 91
Query: 395 IEKTNDCFV*SMMLRADSQSHRITPEEAKYKL--V*SXXCGDPDLRMFRTW-*RMMAAPS 565
I KT + + + + + E+AK+KL V S G + T+ R + P
Sbjct: 92 IPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPD 151
Query: 566 ATXTXLSKSTIPSS*TSQLXXLWXFIKFESGXLVYDHGXAVTWGRVGTIVSRXKH 730
+ K+ + + FIKF+ G +V G T GRVG I +R KH
Sbjct: 152 ----PIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNT-GRVGVIKNREKH 201
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 120 GPKKHLKALNAPQAWDVGQNLGGVYAPE 203
G KKHLK LNAP+ W + LGG +AP+
Sbjct: 4 GLKKHLKRLNAPKHWML-DKLGGAFAPK 30
>06_03_0560 + 22174655-22174720,22175208-22175615,22176540-22177787
Length = 573
Score = 31.5 bits (68), Expect = 0.92
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 194 IHTAQVLSNIPCLGSVKRFQMLLRALAPMLTSIKSR 87
+ T + S IP + K FQ+LLR AP L +K R
Sbjct: 35 VSTTPIFSKIPRAQTTKDFQVLLRIEAPPLVDLKGR 70
>11_01_0268 -
2029007-2029464,2029521-2029615,2030815-2031077,
2031154-2031279,2031404-2032996
Length = 844
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 489 WCKVXRVATRT*ECSVLGNA*WPHHPLPXP 578
WC V R + E V+ N WP HP+ P
Sbjct: 355 WCDVLR--KKNVETVVMANCQWPSHPIEFP 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,460,899
Number of Sequences: 37544
Number of extensions: 532378
Number of successful extensions: 1241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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