BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M09
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 113 3e-25
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 113 3e-25
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 113 3e-25
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 110 2e-24
X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein ( Dros... 29 6.4
X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein ( Dros... 29 6.4
AE014297-252|AAN13239.1| 431|Drosophila melanogaster CG12162-PB... 29 6.4
AE014296-2992|AAN11689.1| 906|Drosophila melanogaster CG8127-PD... 29 6.4
AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA... 29 6.4
AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC... 29 6.4
AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB... 29 6.4
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 113 bits (272), Expect = 3e-25
Identities = 96/244 (39%), Positives = 113/244 (46%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFDRE 294
AR + KRL PK MLDK V PRPSTG P LRE LP F + +
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGV-FAPRPSTG-PHKLRESLPLLIFLRNRLKYALNGA 59
Query: 295 TKS*KIVNQRLIKVDGES*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP*X 474
+ KIV QRL+KVDG+ P + FRL+YDVKGRF I
Sbjct: 60 EVT-KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISA-E 117
Query: 475 XXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV*V 654
K + G K VP+LVTHDGRTIRYP PLI N S Q+D+A+ I +
Sbjct: 118 EAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDS 177
Query: 655 WGXCV*SRGXRNLGPCGHHRVPRXTSPAPSTLCTSRDSTGTHPSPXGLNXVFIIXPGPRN 834
C+ G RNLG G V R P + +DS G H L VFII G
Sbjct: 178 GNLCM-ITGGRNLGRVG-TVVNRERHPGSFDIVHIKDSQG-HVFATRLTNVFIIGKG-NK 233
Query: 835 AYIS 846
YIS
Sbjct: 234 PYIS 237
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 113 bits (272), Expect = 3e-25
Identities = 96/244 (39%), Positives = 113/244 (46%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFDRE 294
AR + KRL PK MLDK V PRPSTG P LRE LP F + +
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGV-FAPRPSTG-PHKLRESLPLLIFLRNRLKYALNGA 59
Query: 295 TKS*KIVNQRLIKVDGES*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP*X 474
+ KIV QRL+KVDG+ P + FRL+YDVKGRF I
Sbjct: 60 EVT-KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISA-E 117
Query: 475 XXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV*V 654
K + G K VP+LVTHDGRTIRYP PLI N S Q+D+A+ I +
Sbjct: 118 EAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDS 177
Query: 655 WGXCV*SRGXRNLGPCGHHRVPRXTSPAPSTLCTSRDSTGTHPSPXGLNXVFIIXPGPRN 834
C+ G RNLG G V R P + +DS G H L VFII G
Sbjct: 178 GNLCM-ITGGRNLGRVG-TVVNRERHPGSFDIVHIKDSQG-HVFATRLTNVFIIGKG-NK 233
Query: 835 AYIS 846
YIS
Sbjct: 234 PYIS 237
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 113 bits (272), Expect = 3e-25
Identities = 96/244 (39%), Positives = 113/244 (46%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFDRE 294
AR + KRL PK MLDK V PRPSTG P LRE LP F + +
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGV-FAPRPSTG-PHKLRESLPLLIFLRNRLKYALNGA 59
Query: 295 TKS*KIVNQRLIKVDGES*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP*X 474
+ KIV QRL+KVDG+ P + FRL+YDVKGRF I
Sbjct: 60 EVT-KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISA-E 117
Query: 475 XXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV*V 654
K + G K VP+LVTHDGRTIRYP PLI N S Q+D+A+ I +
Sbjct: 118 EAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDS 177
Query: 655 WGXCV*SRGXRNLGPCGHHRVPRXTSPAPSTLCTSRDSTGTHPSPXGLNXVFIIXPGPRN 834
C+ G RNLG G V R P + +DS G H L VFII G
Sbjct: 178 GNLCM-ITGGRNLGRVG-TVVNRERHPGSFDIVHIKDSQG-HVFATRLTNVFIIGKG-NK 233
Query: 835 AYIS 846
YIS
Sbjct: 234 PYIS 237
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 110 bits (265), Expect = 2e-24
Identities = 95/244 (38%), Positives = 112/244 (45%)
Frame = +1
Query: 115 ARALRSI*KRLTLPKHGMLDKTWAVCMHPRPSTGSPQSLRECLPPGDFPEESSEVCFDRE 294
AR + KRL PK MLDK V PRPSTG P LRE LP F + +
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGV-FAPRPSTG-PHKLRESLPLLTFLRNRLKYALNGA 59
Query: 295 TKS*KIVNQRLIKVDGES*D*PYLSCWIYGCCLN*ED**LFRLIYDVKGRFTIPPYHP*X 474
+ KIV QRL+KV G+ P + FRL+YDVKGRF I
Sbjct: 60 EVT-KIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISA-E 117
Query: 475 XXXXXXXKSXVWRPGPKNVPYLVTHDGRTIRYPXPLIKVNXSXQLDLATTXIMXLHQV*V 654
K + G K VP+LVTHDGRTIRYP PLI N S Q+D+A+ I +
Sbjct: 118 EAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDS 177
Query: 655 WGXCV*SRGXRNLGPCGHHRVPRXTSPAPSTLCTSRDSTGTHPSPXGLNXVFIIXPGPRN 834
C+ G RNLG G V R P + +DS G H L VFII G
Sbjct: 178 GNLCM-ITGGRNLGRVG-TVVNRERHPGSFDIVHIKDSQG-HVFATRLTNVFIIGKG-NK 233
Query: 835 AYIS 846
YIS
Sbjct: 234 PYIS 237
>X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein (
Drosophila mRNA forecdysone-inducible gene E75B. ).
Length = 1394
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 1145 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 1186
>X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein (
Drosophila mRNA forecdysone-inducible gene E75A. ).
Length = 1237
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 988 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 1029
>AE014297-252|AAN13239.1| 431|Drosophila melanogaster CG12162-PB,
isoform B protein.
Length = 431
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 265 PQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAW 155
PQ H A+ R G VSG PP+ C T H +
Sbjct: 21 PQGGHPAAAWRQEAGGVSDQVSGVLNPPENCITRHLY 57
>AE014296-2992|AAN11689.1| 906|Drosophila melanogaster CG8127-PD,
isoform D protein.
Length = 906
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 695 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 736
>AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA,
isoform A protein.
Length = 1355
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 1144 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 1185
>AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC,
isoform C protein.
Length = 1199
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 988 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 1029
>AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB,
isoform B protein.
Length = 1412
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 268 IPQENHQGASTRANFVGTRLTVSGAYTPPKFCPTSHAWGALS 143
+ +EN AS+ N VG R S + PP WG+ S
Sbjct: 1201 LKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSS 1242
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,241,559
Number of Sequences: 53049
Number of extensions: 885135
Number of successful extensions: 1912
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -