Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M09
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   0.92 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   2.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   2.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   2.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   2.1  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +3

Query: 120 GPKKHLKALNAPQAWD---VGQNL 182
           GPK+HL++L  P   D   VG+NL
Sbjct: 336 GPKEHLRSLGIPVVVDLPGVGENL 359


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 719 GTRWCPHGPKLRXPRD 672
           GT WC HG K   P +
Sbjct: 33  GTLWCGHGNKSSGPNE 48


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 719 GTRWCPHGPKLRXPRD 672
           GT WC HG K   P +
Sbjct: 38  GTLWCGHGNKSSGPNE 53


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 206 GLGCIHT-AQVLSNIPCLGSVKRFQMLLRALAPML 105
           G+G +   A VL+   CLGS  +   L RALA ++
Sbjct: 565 GIGVVVLFAVVLAGATCLGSSIKAMWLRRALASLM 599


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 719 GTRWCPHGPKLRXPRD 672
           GT WC HG K   P +
Sbjct: 38  GTLWCGHGNKSSGPNE 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,779
Number of Sequences: 438
Number of extensions: 5272
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)