Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M08
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   7.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.4  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 485 EKAFVYSYGQVGPVPELTDIKTR 553
           E AF Y YG   P  + T+ +T+
Sbjct: 238 EIAFAYKYGDPIPYIQYTETETK 260


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 388 EICKEFACHKLQHLANVPLSRPRPLL 465
           ++ K    HK Q L  +P  + +PLL
Sbjct: 201 DVIKTSGPHKFQPLLRLPKFKKKPLL 226


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 783 TFLHPDDSIQCACI 742
           T LHPDD+I+ A I
Sbjct: 9   THLHPDDAIRRAKI 22


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 783 TFLHPDDSIQCACI 742
           T LHPDD+I+ A I
Sbjct: 9   THLHPDDAIRRAKI 22


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 167  PTRSRLPNQHPXFSVTLLCPKEKRFLNPFT*TLTLKSS 280
            P+  +  + HP  ++  LC K +   N  T + T  SS
Sbjct: 980  PSGGKKGSSHPLAALQKLCDKTETHTNNRTHSATSNSS 1017


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,611
Number of Sequences: 336
Number of extensions: 4680
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)